RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 UBL7Q96S82 380 aaPredicted RBP14.1□□□□□ -0.15
TPM1-223ENST00000560445 CCDC3Q9BQI4 270 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 DPH1Q9BZG8 443 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 CLPBQ9H078 707 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 TCEAL2Q9H3H9 227 aaPredicted RBP14.1□□□□□ -0.15
TPM1-223ENST00000560445 TSPY26PQ9H489 355 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 NOD2Q9HC29 1040 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 PCDHGC4Q9Y5F7 938 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 SHROOM3Q8TF72 1996 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 PEX11BO96011 259 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 PRKCGP05129 697 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 GLB1P16278 677 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 ZFXP17010 805 aaPredicted RBP14.09□□□□□ -0.15
TPM1-223ENST00000560445 TGM2P21980 687 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 GJC1P36383 396 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 DPTQ07507 201 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 DPYSL3Q14195 570 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 CNGA3Q16281 694 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 CLPPQ16740 277 aaPredicted RBP14.09□□□□□ -0.15
TPM1-223ENST00000560445 ANKRD20A8PQ5CZ79 823 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 ALG1LQ6GMV1 187 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 ZNF765Q7L2R6 523 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 KYQ8NBH2 561 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 FAM46DQ8NEK8 389 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 MAML1Q92585 1016 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 PDXPQ96GD0 296 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 SEMA3CQ99985 751 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 CDH19Q9H159 772 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 NT5MQ9NPB1 228 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 LUC7LQ9NQ29 371 aaKnown RBP14.09□□□□□ -0.15
TPM1-223ENST00000560445 ETNK2Q9NVF9 386 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 TRNAU1APQ9NX07 287 aaKnown RBP14.09□□□□□ -0.15
TPM1-223ENST00000560445 AKAP7Q9P0M2 348 aaPredicted RBP14.09□□□□□ -0.15
TPM1-223ENST00000560445 SIRPGQ9P1W8 387 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 MOSPD1Q9UJG1 213 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 TTLL3Q9Y4R7 772 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 PCDHB1Q9Y5F3 818 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 RAI2Q9Y5P3 530 aa14.09□□□□□ -0.15
TPM1-223ENST00000560445 ATRXP46100 2492 aa14.08□□□□□ -0.15
TPM1-223ENST00000560445 ZFHX4Q86UP3 3567 aa14.08□□□□□ -0.15
TPM1-223ENST00000560445 LRP4O75096 1905 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 PRSS38A1L453 326 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 GOLGA6CA6NDK9 693 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 GOLGA6BA6NDN3 693 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 NUDT21O43809 227 aaKnown RBP14.08□□□□□ -0.16
TPM1-223ENST00000560445 MFSD11O43934 449 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 MPOP05164 745 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 GOLGA6DP0CG33 693 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 TCF4P15884 667 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 TMPRSS3P57727 454 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 C3orf38Q5JPI3 329 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 RAET1GQ6H3X3 334 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 BZW1Q7L1Q6 419 aaKnown RBP14.08□□□□□ -0.16
TPM1-223ENST00000560445 NLRP8Q86W28 1048 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 HEATR4Q86WZ0 1026 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 NRSN1Q8IZ57 195 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 LSM14AQ8ND56 463 aaKnown RBP14.08□□□□□ -0.16
TPM1-223ENST00000560445 KCNE4Q8WWG9 221 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 OR1E3Q8WZA6 343 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 CCDC74AQ96AQ1 378 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 LIN37Q96GY3 246 aaPredicted RBP14.08□□□□□ -0.16
TPM1-223ENST00000560445 BTBD6Q96KE9 485 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 MAK16Q9BXY0 300 aaKnown RBP14.08□□□□□ -0.16
TPM1-223ENST00000560445 TEX101Q9BY14 249 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 ADGRE3Q9BY15 652 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 BRD8Q9H0E9 1235 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 DPEP2Q9H4A9 486 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 CYP4F12Q9HCS2 524 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 FGF22Q9HCT0 170 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 RBM22Q9NW64 420 aaKnown RBP eCLIP14.08□□□□□ -0.16
TPM1-223ENST00000560445 GOLGA6AQ9NYA3 693 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 APPL1Q9UKG1 709 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 PPIL1Q9Y3C6 166 aa14.08□□□□□ -0.16
TPM1-223ENST00000560445 ASXL3Q9C0F0 2248 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 TEX51A0A1B0GUA7 166 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 TMEM202A6NGA9 273 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 CAPN8A6NHC0 703 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 D6RAR5 112 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 PPP1R12AO14974 1030 aaPredicted RBP14.07□□□□□ -0.16
TPM1-223ENST00000560445 TLX3O43711 291 aaPredicted RBP14.07□□□□□ -0.16
TPM1-223ENST00000560445 ITGA2BP08514 1039 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 MYF5P13349 255 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 CCNB1P14635 433 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 SLC1A1P43005 524 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 GPR1P46091 355 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 MAXP61244 160 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 TRAF2Q12933 501 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 LRP8Q14114 963 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 C14orf28Q4W4Y0 310 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 PERM1Q5SV97 790 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 CERCAMQ5T4B2 595 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 LRRC38Q5VT99 294 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 DENND2CQ68D51 928 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 NCBP2-AS2Q69YL0 99 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 TXNRD3NBQ6F5E7 133 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 GPR155Q7Z3F1 870 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 CCNJLQ8IV13 435 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 CCDC13Q8IYE1 715 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 PGBD5Q8N414 524 aa14.07□□□□□ -0.16
TPM1-223ENST00000560445 PLA2G15Q8NCC3 412 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms