RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CER1O95813 267 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 TPSB2P20231 275 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 HTR1BP28222 390 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 MAT2AP31153 395 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 RPL22P35268 128 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 PLA2G5P39877 138 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 STC1P52823 247 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 ATXN3P54252 364 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 DCDC1P59894 354 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 ARHGAP8P85298 464 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 TPSAB1Q15661 275 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 CNGA3Q16281 694 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 LPAL2Q16609 132 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 TRIM61Q5EBN2 209 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 SIRPB2Q5JXA9 342 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 SEL1L3Q68CR1 1132 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 LRRC66Q68CR7 880 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 CRTC1Q6UUV9 634 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 ZNF572Q7Z3I7 529 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 ABI3BPQ7Z7G0 1075 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 C17orf53Q8N3J3 647 aaPredicted RBP12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 BBOF1Q8ND07 529 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 BRSK1Q8TDC3 778 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 PEX13Q92968 403 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 CENPTQ96BT3 561 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 NUS1Q96E22 293 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 DTD2Q96FN9 168 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 CAPZA3Q96KX2 299 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 COQ10AQ96MF6 247 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 PLEKHG4BQ96PX9 1271 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 ORAI3Q9BRQ5 295 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 WRAP53Q9BUR4 548 aaKnown RBP12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 C10orf88Q9H8K7 445 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 ETNK1Q9HBU6 452 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 CAPN10Q9HC96 672 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 SEMA4GQ9NTN9 838 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 UBP1Q9NZI7 540 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 PKP3Q9Y446 797 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 SCN8AQ9UQD0 1980 aa12.06□□□□□ -0.48
RABGGTA-215ENST00000560207 TLR4O00206 839 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ARHGAP33O14559 1287 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 RECQL5O94762 991 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 URI1O94763 535 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 CFIP05156 583 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 APRTP07741 180 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ATXN1LP0C7T5 689 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ZNF883P0CG24 379 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 MLNP12872 115 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 CTPS1P17812 591 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 HADHAP40939 763 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 MAGEA6P43360 314 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 KCNJ1P48048 391 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 NPY2RP49146 381 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ARRB1P49407 418 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 BLKP51451 505 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 THOP1P52888 689 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 BASP1P80723 227 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 DR1Q01658 176 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 PTSQ03393 145 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 GALNT3Q14435 633 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 IHHQ14623 411 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 TAF1AQ15573 450 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ESRP1Q6NXG1 681 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 PPP1R21Q6ZMI0 780 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 TMC3Q7Z5M5 1100 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ZCCHC9Q8N567 271 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 DEFB119Q8N690 84 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 PDCD7Q8N8D1 485 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 DNAAF3Q8N9W5 541 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 SPATA4Q8NEY3 305 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 KLF6Q99612 283 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ZSCAN5AQ9BUG6 496 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 FICDQ9BVA6 458 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 XAB2Q9HCS7 855 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 GDF3Q9NR23 364 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 APPL1Q9UKG1 709 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ITM2BQ9Y287 266 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 ZNF711Q9Y462 761 aa12.05□□□□□ -0.48
RABGGTA-215ENST00000560207 RIF1Q5UIP0 2472 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 ADAMTS9Q9P2N4 1935 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 MAGEB16A2A368 324 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 FAM187AA6NFU0 413 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 CACNB4O00305 520 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 AGTP01019 485 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 ALPIP09923 528 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 LPOP22079 712 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 LHCGRP22888 699 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 MAOBP27338 520 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 TRIM23P36406 574 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 SPINT3P49223 89 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 GPS1Q13098 491 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 SLC14A1Q13336 389 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 PTK6Q13882 451 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 CDKN3Q16667 212 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 LRRC73Q5JTD7 316 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 TTC27Q6P3X3 843 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 KDELC2Q7Z4H8 507 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 GLT6D1Q7Z4J2 308 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 TECPR1Q7Z6L1 1165 aa12.04□□□□□ -0.48
RABGGTA-215ENST00000560207 HOOK3Q86VS8 718 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms