RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 C5orf34Q96MH7 638 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 GPATCH2LQ9NWQ4 482 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 FARSAQ9Y285 508 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 ORC1Q13415 861 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 GPRIN3Q6ZVF9 776 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF709Q8N972 641 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 SERPINB11Q96P15 392 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 VAT1Q99536 393 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 TOR3AQ9H497 397 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 TRPV4Q9HBA0 871 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 TMEM27Q9HBJ8 222 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF69Q9UC07 566 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 BBIP1A8MTZ0 92 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 MAGP20916 626 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 HSD17B2P37059 387 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 C1QBPQ07021 282 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 THAP6Q8TBB0 222 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 FERD3LQ96RJ6 166 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 SH2D3AQ9BRG2 576 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZDHHC6Q9H6R6 413 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 SERPINA6P08185 405 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 PRKCDQ05655 676 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 RGL4Q8IZJ4 473 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 OR52K1Q8NGK4 314 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 PRICKLE1Q96MT3 831 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 MRPL57Q9BQC6 102 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF700Q9H0M5 742 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 TPK1Q9H3S4 243 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 PITPNM1O00562 1244 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 E2F3O00716 465 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 ALDH2P05091 517 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF14P17017 642 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 RXRBP28702 533 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 RORCP51449 518 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 FIP1L1Q6UN15 594 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 RDH11Q8TC12 318 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 PPCDCQ96CD2 204 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 TCF7L1Q9HCS4 588 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 MTRRQ9UBK8 725 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 AP4B1Q9Y6B7 739 aa13.86□□□□□ -0.19
CSPG4P12-202ENST00000559989 MDFIC2A0A1B0GVS7 189 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ABLIM1O14639 778 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 TUBG1P23258 451 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 IGFBP5P24593 272 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 PRDX5P30044 214 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 PHC1P78364 1004 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 PNLDC1Q8NA58 520 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF398Q8TD17 642 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 TM9SF3Q9HD45 589 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 MRPS33Q9Y291 106 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 H7C2Y5 167 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 DDX3XO00571 662 aaKnown RBP eCLIP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 NUMBP49757 651 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 SUSD4Q5VX71 490 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 C1orf186Q6ZWK4 172 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 LHFPL3Q86UP9 236 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 PIWIL2Q8TC59 973 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 UFD1Q92890 307 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 OTUB2Q96DC9 234 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ARAP3Q8WWN8 1544 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 METP08581 1390 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 DNMT1P26358 1616 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 TEX13CA0A0J9YWL9 993 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 FADS2P1A8MWK0 482 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 MATN2O00339 956 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 GSC2O15499 205 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF12P17014 697 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 TIE1P35590 1138 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 RPS9P46781 194 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ITGA7Q13683 1181 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 TMEM161BQ8NDZ6 487 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ELAC1Q9H777 363 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 MED31Q9Y3C7 131 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 KAT6AQ92794 2004 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 SSX4O60224 188 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 TSPAN3O60637 253 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 IFI30P13284 250 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 GRIA4P48058 902 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 RPL38P63173 70 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 RNASEH2BQ5TBB1 312 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 SPATA19Q7Z5L4 167 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 MREGQ8N565 214 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 FBXO25Q8TCJ0 367 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 CPB2Q96IY4 423 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 GLT1D1Q96MS3 346 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 MBOAT7Q96N66 472 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 MFSD1Q9H3U5 465 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 UCKL1Q9NWZ5 548 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 HSBP1L1C9JCN9 74 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 SPARCP09486 303 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 CDC25CP30307 473 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ELP6Q0PNE2 266 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 HAGHLQ6PII5 290 aaPredicted RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 GALNT5Q7Z7M9 940 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 GPRC5AQ8NFJ5 357 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 HOPXQ9BPY8 73 aaPredicted RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 EDARQ9UNE0 448 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms