RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 CCDC112Q8NEF3 446 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 CCL4L1Q8NHW4 92 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 ZDHHC1Q8WTX9 485 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 NSMCE1Q8WV22 266 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 SPOCK2Q92563 424 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 NUS1Q96E22 293 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 COQ10AQ96MF6 247 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 TAAR9Q96RI9 348 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 ERGIC2Q96RQ1 377 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 DPYSL5Q9BPU6 564 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 TEX101Q9BY14 249 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 SEMA6CQ9H3T2 930 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 ZWILCHQ9H900 591 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 CARS2Q9HA77 564 aaKnown RBP9.18□□□□□ -0.94
HDDC3-204ENST00000559834 RDH14Q9HBH5 336 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 SPATS2LQ9NUQ6 558 aaKnown RBP9.18□□□□□ -0.94
HDDC3-204ENST00000559834 GPATCH2LQ9NWQ4 482 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 LIMA1Q9UHB6 759 aaKnown RBP9.18□□□□□ -0.94
HDDC3-204ENST00000559834 PCSK1NQ9UHG2 260 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 PHTF1Q9UMS5 762 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 PCDHGA4Q9Y5G9 962 aa9.18□□□□□ -0.94
HDDC3-204ENST00000559834 C9orf172C9J069 976 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 PYCARD-AS1I3L0S3 204 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 PSMD11O00231 422 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 SOCS5O75159 536 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 PPFIA2O75334 1257 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 CEACAM5P06731 702 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 FAM87AP0C7U9 286 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 CYP2A6P11509 494 aaPredicted RBP9.17□□□□□ -0.94
HDDC3-204ENST00000559834 ATP1A3P13637 1013 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 TEAD1P28347 426 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 CSTF2P33240 577 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDDC3-204ENST00000559834 ETV5P41161 510 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 MAZP56270 477 aaKnown RBP9.17□□□□□ -0.94
HDDC3-204ENST00000559834 OR1D5P58170 312 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 OGDHQ02218 1023 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 SQSTM1Q13501 440 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 ZNF235Q14590 738 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 NR1D2Q14995 579 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 C16orf72Q14CZ0 275 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 TBR1Q16650 682 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 CA9Q16790 459 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 PPP6R3Q5H9R7 873 aaPredicted RBP9.17□□□□□ -0.94
HDDC3-204ENST00000559834 RALGPS1Q5JS13 557 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 DENND2CQ68D51 928 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 PLEKHA7Q6IQ23 1121 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 ZNF438Q7Z4V0 828 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 VASH2Q86V25 355 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 HEATR4Q86WZ0 1026 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 SFTPA2Q8IWL1 248 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 ARHGAP12Q8IWW6 846 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 AGBL5Q8NDL9 886 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 OR4D9Q8NGE8 314 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 FNIP1Q8TF40 1166 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 PDCD6IPQ8WUM4 868 aaKnown RBP9.17□□□□□ -0.94
HDDC3-204ENST00000559834 SNRNP25Q9BV90 132 aaKnown RBP9.17□□□□□ -0.94
HDDC3-204ENST00000559834 ANO10Q9NW15 660 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 FOXJ2Q9P0K8 574 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 TAAR2Q9P1P5 351 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 B4GALT6Q9UBX8 382 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 MYO6Q9UM54 1294 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 PCDHGC4Q9Y5F7 938 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 PCDHGA3Q9Y5H0 932 aa9.17□□□□□ -0.94
HDDC3-204ENST00000559834 MGAQ8IWI9 3026 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 IGHV5-10-1A0A0J9YXX1 117 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 GOLGA6CA6NDK9 693 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 GOLGA6BA6NDN3 693 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 TMEM191CA6NGB0 347 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 TMCO5BA8MYB1 307 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 H3BRJ5 948 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 CAPN5O15484 640 aaPredicted RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SUV39H1O43463 412 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 HEXIM1O94992 359 aaKnown RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 ECEL1O95672 775 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 IVLP07476 585 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 GOLGA6DP0CG33 693 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 CCL4P13236 92 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 ITGB6P18564 788 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 CD1CP29017 333 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 MIPP30301 263 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 VIPR1P32241 457 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 ARL4AP40617 200 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 GNPDA1P46926 289 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 LIMK2P53671 638 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 CDK3Q00526 305 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 MYL5Q02045 173 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SLC10A7Q0GE19 358 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SRSF6Q13247 344 aaKnown RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 BOLA3Q53S33 107 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 ARMC12Q5T9G4 340 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 ARHGAP36Q6ZRI8 547 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 TMPRSS9Q7Z410 1059 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 IRF2BP2Q7Z5L9 587 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 NRROSQ86YC3 692 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 CBARPQ8N350 705 aaPredicted RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 IL22RA1Q8N6P7 574 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 ARFGAP1Q8N6T3 406 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 DTD2Q96FN9 168 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SCRN2Q96FV2 425 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms