RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ALDH1A2O94788 518 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 C1SP09871 688 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 ELFN1P0C7U0 828 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 TSHRP16473 764 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 PAMP19021 973 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 LHCGRP22888 699 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 DRD3P35462 400 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 MMP12P39900 470 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 ZNF140P52738 457 aaPredicted RBP10.44□□□□□ -0.74
TPM1-221ENST00000559831 PDE1BQ01064 536 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 CCDC15Q0P6D6 951 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 ELP6Q0PNE2 266 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 SFSWAPQ12872 951 aaKnown RBP10.44□□□□□ -0.74
TPM1-221ENST00000559831 RALGDSQ12967 914 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 MTAPQ13126 283 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 CNGA3Q16281 694 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 SKIDA1Q1XH10 827 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 AGBL4Q5VU57 503 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 CWF19L1Q69YN2 538 aaKnown RBP10.44□□□□□ -0.74
TPM1-221ENST00000559831 ANO7Q6IWH7 933 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 MICALCLQ6ZW33 695 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 FAM124AQ86V42 546 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 RASSF3Q86WH2 238 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 UNC5BQ8IZJ1 945 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 OTUD6BQ8N6M0 293 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 CXorf40AQ8TE69 158 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 FBF1Q8TES7 1133 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 STYXQ8WUJ0 223 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 RAB7BQ96AH8 199 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 LYSMD1Q96S90 227 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 EPB41L4BQ9H329 900 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 PLAC1Q9HBJ0 212 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 NLE1Q9NVX2 485 aaPredicted RBP10.44□□□□□ -0.74
TPM1-221ENST00000559831 IL1RAPL1Q9NZN1 696 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 NCKAP1Q9Y2A7 1128 aa10.44□□□□□ -0.74
TPM1-221ENST00000559831 PLXNB3Q9ULL4 1909 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 A0A087WUV0 522 aaPredicted RBP10.43□□□□□ -0.74
TPM1-221ENST00000559831 ZCWPW2A0A1B0GU75 182 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 TCRBV9S1A1TA0A576 114 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 PRR23AA6NEV1 266 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 TMEM221A6NGB7 291 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 GOLGA8KD6RF30 607 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 GOLGA8TH3BQL2 631 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 M0R296 226 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 SPINT1O43278 529 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 SPAG6O75602 509 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 RPP40O75818 363 aaKnown RBP10.43□□□□□ -0.74
TPM1-221ENST00000559831 PCDH8O95206 1070 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 VAPBO95292 243 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 PAPSS2O95340 614 aaPredicted RBP10.43□□□□□ -0.74
TPM1-221ENST00000559831 ABHD2P08910 425 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 GSTA2P09210 222 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 ZNF30P17039 623 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 STX2P32856 288 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 RPS9P46781 194 aaKnown RBP10.43□□□□□ -0.74
TPM1-221ENST00000559831 LIG3P49916 1009 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 SUOXP51687 545 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 ARSDP51689 593 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 PRAMEP78395 509 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 ZBTB16Q05516 673 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 SLC29A2Q14542 456 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 CASP8Q14790 479 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 EFTUD2Q15029 972 aaKnown RBP eCLIP10.43□□□□□ -0.741e-5■■■□□ 16.7
TPM1-221ENST00000559831 ACOX1Q15067 660 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 CDKN3Q16667 212 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 LONRF1Q17RB8 773 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 TMEM31Q5JXX7 168 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 ARMC3Q5W041 872 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 ALS2CLQ60I27 953 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 TRMT10BQ6PF06 316 aaKnown RBP10.43□□□□□ -0.74
TPM1-221ENST00000559831 TMEM135Q86UB9 458 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 KCNMB4Q86W47 210 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 SPEM1Q8N4L4 309 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 OR13J1Q8NGT2 312 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 OR6P1Q8NGX9 317 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 OR14C36Q8NHC7 312 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 HDAC10Q969S8 669 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 ZBTB9Q96C00 473 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 MRRFQ96E11 262 aaKnown RBP10.43□□□□□ -0.74
TPM1-221ENST00000559831 TBATAQ96M53 351 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 SUDS3Q9H7L9 328 aaPredicted RBP10.43□□□□□ -0.74
TPM1-221ENST00000559831 CD93Q9NPY3 652 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 TREX1Q9NSU2 369 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 C20orf96Q9NUD7 363 aaPredicted RBP10.43□□□□□ -0.74
TPM1-221ENST00000559831 PKD2L2Q9NZM6 624 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 IL17CQ9P0M4 197 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 CD84Q9UIB8 345 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 FKBPLQ9UIM3 349 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 SCML1Q9UN30 329 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 PLAAQ9Y263 795 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 COQ6Q9Y2Z9 468 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 FADS3Q9Y5Q0 445 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 FAM169AQ9Y6X4 670 aa10.43□□□□□ -0.74
TPM1-221ENST00000559831 CCDC162PA2VCL2 907 aa10.42□□□□□ -0.74
TPM1-221ENST00000559831 OR51F1A6NGY5 319 aa10.42□□□□□ -0.74
TPM1-221ENST00000559831 AREL1O15033 823 aa10.42□□□□□ -0.74
TPM1-221ENST00000559831 PI15O43692 258 aa10.42□□□□□ -0.74
TPM1-221ENST00000559831 LZTS3O60299 673 aaPredicted RBP10.42□□□□□ -0.74
TPM1-221ENST00000559831 MMP20O60882 483 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms