RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SLCO3A1Q9UIG8 710 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 PPIL1Q9Y3C6 166 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 ZNF711Q9Y462 761 aa12.7□□□□□ -0.38
USP3-213ENST00000559711 MYLKQ15746 1914 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 CCT8L1PA6NM43 557 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 WASH3PC4AMC7 463 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 G3V2L1 256 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 RFXAPO00287 272 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 KLHL2O95198 593 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
USP3-213ENST00000559711 ADH1CP00326 375 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 FGF3P11487 239 aaPredicted RBP12.69□□□□□ -0.38
USP3-213ENST00000559711 ADH5P11766 374 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 POLR2EP19388 210 aaKnown RBP12.69□□□□□ -0.38
USP3-213ENST00000559711 GKP32189 559 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 PGGT1BP53609 377 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 SLC12A2P55011 1212 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 OCRLQ01968 901 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 CDKN3Q16667 212 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 C10orf107Q8IVU9 208 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 RYBPQ8N488 228 aaPredicted RBP12.69□□□□□ -0.38
USP3-213ENST00000559711 NAT16Q8N8M0 369 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 RDH11Q8TC12 318 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 ZNF398Q8TD17 642 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 CCT6BQ92526 530 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 EID2BQ96D98 161 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 ASIC4Q96FT7 647 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 MRGPRX3Q96LB0 322 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 TSNARE1Q96NA8 513 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 NDNQ99608 321 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 IGFLR1Q9H665 355 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 POLR3BQ9NW08 1133 aaPredicted RBP12.69□□□□□ -0.38
USP3-213ENST00000559711 MID2Q9UJV3 735 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 ERVW-1Q9UQF0 538 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 RUVBL2Q9Y230 463 aaKnown RBP12.69□□□□□ -0.38
USP3-213ENST00000559711 SLC27A6Q9Y2P4 619 aa12.69□□□□□ -0.38
USP3-213ENST00000559711 TARM1B6A8C7 271 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 TRIM24O15164 1050 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 TROVE2P10155 538 aaKnown RBP eCLIP12.68□□□□□ -0.38
USP3-213ENST00000559711 CTPS1P17812 591 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 KCNA4P22459 653 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 GRK2P25098 689 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 PMLP29590 882 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 SLC26A3P40879 764 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 CCNHP51946 323 aaPredicted RBP12.68□□□□□ -0.38
USP3-213ENST00000559711 XIAPP98170 497 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 RAD51Q06609 339 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 HYAL1Q12794 435 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 DLG1Q12959 904 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 STX3Q13277 289 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 PEX6Q13608 980 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 ZNF460Q14592 562 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 GEN1Q17RS7 908 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 TSNAXIP1Q2TAA8 658 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 TRIM68Q6AZZ1 485 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 FAM45BPQ6NSW5 357 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 ZNF549Q6P9A3 640 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 SYCE2Q6PIF2 218 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 DPY19L3Q6ZPD9 716 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 TNS4Q8IZW8 715 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 FAM45AQ8TCE6 357 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 WFIKKN2Q8TEU8 576 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 KCTD4Q8WVF5 259 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 ZNF641Q96N77 438 aaPredicted RBP12.68□□□□□ -0.38
USP3-213ENST00000559711 GPR63Q9BZJ6 419 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 KDM4CQ9H3R0 1056 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 SUV39H2Q9H5I1 410 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 THAP1Q9NVV9 213 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 FKBPLQ9UIM3 349 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 PKP3Q9Y446 797 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 MIA3Q5JRA6 1907 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 LAMA3Q16787 3333 aa12.68□□□□□ -0.38
USP3-213ENST00000559711 HEPACAM2A8MVW5 462 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 KIAA0754O94854 1291 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 NFATC1O95644 943 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 SERPINE1P05121 402 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 ALPIP09923 528 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 SBK3P0C264 359 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 FDXRP22570 491 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 MC4RP32245 332 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 HNF1BP35680 557 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 DGKGP49619 791 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 SUOXP51687 545 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 CDKN2DP55273 166 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 TIAL1Q01085 375 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP3-213ENST00000559711 ANKRD54Q6NXT1 300 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 CCDC121Q6ZUS5 278 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 TRPM8Q7Z2W7 1104 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 LYSMD3Q7Z3D4 306 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 ZSWIM9Q86XI8 627 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 ETFBKMTQ8IXQ9 262 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 OR2A12Q8NGT7 310 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 TTC8Q8TAM2 541 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 FRS2Q8WU20 508 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 C10orf82Q8WW14 230 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 LPGAT1Q92604 370 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 NXNL1Q96CM4 212 aa12.67□□□□□ -0.38
USP3-213ENST00000559711 UBXN10Q96LJ8 280 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms