RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 FICDQ9BVA6 458 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 SUSD2Q9UGT4 822 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 KLF15Q9UIH9 416 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 TPX2Q9ULW0 747 aaKnown RBP11.45□□□□□ -0.58
SNX1-204ENST00000559061 ANKRD6Q9Y2G4 727 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 PGRMC1O00264 195 aaKnown RBP11.44□□□□□ -0.58
SNX1-204ENST00000559061 TM4SF5O14894 197 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 USP12O75317 370 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 NEBLO76041 1014 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 EPOP01588 193 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 ELFN1P0C7U0 828 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 XPAP23025 273 aaPredicted RBP11.44□□□□□ -0.58
SNX1-204ENST00000559061 CA5AP35218 305 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 NUDT1P36639 197 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 GRIA1P42261 906 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 DPP6P42658 865 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 ETF1P62495 437 aaKnown RBP11.44□□□□□ -0.58
SNX1-204ENST00000559061 POLR2LP62875 67 aaKnown RBP11.44□□□□□ -0.58
SNX1-204ENST00000559061 ZNF423Q2M1K9 1284 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 PRAMEF14Q5SWL7 426 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 USP45Q70EL2 814 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 KANSL1Q7Z3B3 1105 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 ZSCAN30Q86W11 494 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 SLC25A41Q8N5S1 370 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
SNX1-204ENST00000559061 ETNK1Q9HBU6 452 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 AASDHPPTQ9NRN7 309 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 DRG1Q9Y295 367 aaKnown RBP11.44□□□□□ -0.58
SNX1-204ENST00000559061 ZNF711Q9Y462 761 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 HS3ST3A1Q9Y663 406 aa11.44□□□□□ -0.58
SNX1-204ENST00000559061 PTPRZ1P23471 2315 aaPredicted RBP11.44□□□□□ -0.58
SNX1-204ENST00000559061 TLR4O00206 839 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 PSMD11O00231 422 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 GAPDHSO14556 408 aaPredicted RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 PCCBP05166 539 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 CYP2A6P11509 494 aaPredicted RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 GNSP15586 552 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 TCP1P17987 556 aaKnown RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 AKT2P31751 481 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 GEMP55040 296 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 EIF2B5Q13144 721 aaKnown RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 SEMA5AQ13591 1074 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 FZD2Q14332 565 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 PTPRCAPQ14761 206 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 PARP6Q2NL67 630 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 HLA-BQ31612 363 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 DENND2CQ68D51 928 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 ITPRIPL1Q6GPH6 555 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 ESRP1Q6NXG1 681 aaKnown RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 SYT10Q6XYQ8 523 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 Q6ZSR6 202 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 ZNF534Q76KX8 674 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 TMC3Q7Z5M5 1100 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 IQCHQ86VS3 1027 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 MINDY1Q8N5J2 469 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 SCAMP4Q969E2 229 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 CAPZA3Q96KX2 299 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 LGR4Q9BXB1 951 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 ABCG8Q9H221 673 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 MAGEE1Q9HCI5 957 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 DNAAF2Q9NVR5 837 aaKnown RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 PIH1D1Q9NWS0 290 aaKnown RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 CD84Q9UIB8 345 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 TMPRSS11EQ9UL52 423 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 SHOC2Q9UQ13 582 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 ZNF148Q9UQR1 794 aa11.43□□□□□ -0.58
SNX1-204ENST00000559061 TDRD6O60522 2096 aaKnown RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 ARID1BQ8NFD5 2236 aaPredicted RBP11.43□□□□□ -0.58
SNX1-204ENST00000559061 CABIN1Q9Y6J0 2220 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 C1orf232A0A0U1RR37 186 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 TCRBV7S3A2A0A539 114 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 A6NNZ2 444 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 C4orf47A7E2U8 309 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 FADS2P1A8MWK0 482 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 PRR5-ARHGAP8B1AHC4 643 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 LZTS3O60299 673 aaPredicted RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 PHF2O75151 1096 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 ANXA9O76027 345 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 AP2A1O95782 977 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 IFNB1P01574 187 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 FUCA1P04066 466 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 THEGLP0DJG4 465 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 CD59P13987 128 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 ZNF30P17039 623 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 CA4P22748 312 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 STIP1P31948 543 aaKnown RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 TRIM23P36406 574 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 COILP38432 576 aaPredicted RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 PTGIRP43119 386 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 SPINT3P49223 89 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 LIMK1P53667 647 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 EPHB1P54762 984 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 IL9RQ01113 521 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 SGCGQ13326 291 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 INPP5AQ14642 412 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 LRRC14Q15048 493 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 ACOX1Q15067 660 aa11.42□□□□□ -0.58
SNX1-204ENST00000559061 AASDHQ4L235 1098 aaPredicted RBP11.42□□□□□ -0.58
SNX1-204ENST00000559061 HS1BP3Q53T59 392 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms