RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 RAPGEF5Q92565 580 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 RNF157Q96PX1 679 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 LGR4Q9BXB1 951 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 TDRD1Q9BXT4 1180 aaKnown RBP17.03■□□□□ 0.32
LRRC28-210ENST00000558879 WDR26Q9H7D7 661 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 DTLQ9NZJ0 730 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 RAI2Q9Y5P3 530 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 AK5Q9Y6K8 562 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 CPED1A4D0V7 1026 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 C3orf70A6NLC5 250 aaPredicted RBP17.02■□□□□ 0.32
LRRC28-210ENST00000558879 TCEA3O75764 348 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 DXOO77932 396 aaKnown RBP17.02■□□□□ 0.32
LRRC28-210ENST00000558879 HLA-DQB2P05538 268 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 CTSEP14091 401 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 KELP23276 732 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 EIF2S3P41091 472 aaKnown RBP17.02■□□□□ 0.32
LRRC28-210ENST00000558879 ARHGAP25P42331 645 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 PDX1P52945 283 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 DSC2Q02487 901 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 MESDQ14696 234 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 TCEAL1Q15170 157 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 ISXQ2M1V0 245 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 C19orf48Q6RUI8 117 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 SARM1Q6SZW1 724 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 USP45Q70EL2 814 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 TSPAN33Q86UF1 283 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 GKN2Q86XP6 184 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 CNGA4Q8IV77 575 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 TPCN2Q8NHX9 752 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 ARRDC2Q8TBH0 407 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 CCDC42Q96M95 316 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 TEX101Q9BY14 249 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 MRPL40Q9NQ50 206 aaKnown RBP17.02■□□□□ 0.32
LRRC28-210ENST00000558879 PADI4Q9UM07 663 aa17.02■□□□□ 0.32
LRRC28-210ENST00000558879 LOC400499M0QZD8 3231 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 A0A0J9YYE9 177 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 PRSS38A1L453 326 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 NTN3O00634 580 aaPredicted RBP17.01■□□□□ 0.31
LRRC28-210ENST00000558879 TNFP01375 233 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 TRBC1P01850 177 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 MX2P20592 715 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 ETV3P41162 512 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 PPIDQ08752 370 aaKnown RBP17.01■□□□□ 0.31
LRRC28-210ENST00000558879 PTPRRQ15256 657 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 TBC1D25Q3MII6 688 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 SLC9A4Q6AI14 798 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 IGF2-ASQ6U949 168 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 CRTC1Q6UUV9 634 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 RD3Q7Z3Z2 195 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 TECPR1Q7Z6L1 1165 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 HEATR4Q86WZ0 1026 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 GPR156Q8NFN8 814 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 WDR48Q8TAF3 677 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 CCDC3Q9BQI4 270 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 FRMD8Q9BZ67 464 aaPredicted RBP17.01■□□□□ 0.31
LRRC28-210ENST00000558879 ABCG4Q9H172 646 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 INTUQ9ULD6 942 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 DOLKQ9UPQ8 538 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 ENTPD2Q9Y5L3 495 aa17.01■□□□□ 0.31
LRRC28-210ENST00000558879 A0A1W2PNU3 283 aaPredicted RBP17■□□□□ 0.31
LRRC28-210ENST00000558879 CAPN8A6NHC0 703 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 CASC3O15234 703 aaKnown RBP17■□□□□ 0.31
LRRC28-210ENST00000558879 SOD1P00441 154 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 PRLP01236 227 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 CCNB1P14635 433 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 ZNF30P17039 623 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 CTPS1P17812 591 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 CES1P23141 567 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 CDK3Q00526 305 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 DPTQ07507 201 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 ARHGEF7Q14155 803 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 TCEA2Q15560 299 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 TSR1Q2NL82 804 aaKnown RBP17■□□□□ 0.31
LRRC28-210ENST00000558879 LRRC38Q5VT99 294 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 RBM44Q6ZP01 1051 aaKnown RBP17■□□□□ 0.31
LRRC28-210ENST00000558879 Q6ZVL8 140 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 PDZD3Q86UT5 571 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 CCDC13Q8IYE1 715 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 LRRN4Q8WUT4 740 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 HNRNPLLQ8WVV9 542 aaKnown RBP17■□□□□ 0.31
LRRC28-210ENST00000558879 SCG3Q8WXD2 468 aaKnown RBP17■□□□□ 0.31
LRRC28-210ENST00000558879 GRAMD1AQ96CP6 724 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 SMIM14Q96QK8 99 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 LYSMD1Q96S90 227 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 PHPT1Q9NRX4 125 aaPredicted RBP17■□□□□ 0.31
LRRC28-210ENST00000558879 HAUS2Q9NVX0 235 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 RBM22Q9NW64 420 aaKnown RBP eCLIP17■□□□□ 0.31
LRRC28-210ENST00000558879 RABGEF1Q9UJ41 708 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 GPR34Q9UPC5 381 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 IGSF10Q6WRI0 2623 aa17■□□□□ 0.31
LRRC28-210ENST00000558879 LRRD1A4D1F6 860 aa16.99■□□□□ 0.31
LRRC28-210ENST00000558879 AKR1B15C9JRZ8 316 aaPredicted RBP16.99■□□□□ 0.31
LRRC28-210ENST00000558879 PDE2AO00408 941 aaPredicted RBP16.99■□□□□ 0.31
LRRC28-210ENST00000558879 NOBOXO60393 691 aa16.99■□□□□ 0.31
LRRC28-210ENST00000558879 USP12O75317 370 aa16.99■□□□□ 0.31
LRRC28-210ENST00000558879 MPOP05164 745 aa16.99■□□□□ 0.31
LRRC28-210ENST00000558879 MMP2P08253 660 aa16.99■□□□□ 0.31
LRRC28-210ENST00000558879 ABCG1P45844 678 aa16.99■□□□□ 0.31
LRRC28-210ENST00000558879 GABREP78334 506 aa16.99■□□□□ 0.31
LRRC28-210ENST00000558879 IFI35P80217 286 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms