RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ENTPD1P49961 510 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 GALCP54803 685 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 TMPRSS3P57727 454 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 IFI35P80217 286 aaPredicted RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 MRPS34P82930 218 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 SORDQ00796 357 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 POU5F1Q01860 360 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 SRSF1Q07955 248 aaKnown RBP eCLIP4.52□□□□□ -1.69
CASC4-206ENST00000558847 MTX1Q13505 466 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 MORN5Q5VZ52 161 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 ZNF626Q68DY1 528 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 METTL2BQ6P1Q9 378 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 TMEM71Q6P5X7 295 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 HIST3H2AQ7L7L0 130 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 CACNA2D4Q7Z3S7 1137 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 C1QL2Q7Z5L3 287 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 DNAAF5Q86Y56 855 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 MB21D2Q8IYB1 491 aaPredicted RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 AGBL3Q8NEM8 1001 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 GABPB2Q8TAK5 448 aaPredicted RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 COQ8BQ96D53 544 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 RRNAD1Q96FB5 475 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 METTL2AQ96IZ6 378 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 OR2A14Q96R47 310 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 BAG1Q99933 345 aaPredicted RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 WDR77Q9BQA1 342 aaPredicted RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 C1QTNF7Q9BXJ2 289 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 NPFFR1Q9GZQ6 430 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 PLK3Q9H4B4 646 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 MAP6D1Q9H9H5 199 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 PDE7BQ9NP56 450 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 TUBA8Q9NY65 449 aaPredicted RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 NFKBIL1Q9UBC1 381 aaPredicted RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 CNOT8Q9UFF9 292 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 SEC63Q9UGP8 760 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 FBXW11Q9UKB1 542 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 PCDHA12Q9UN75 941 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 EXO1Q9UQ84 846 aaKnown RBP4.52□□□□□ -1.69
CASC4-206ENST00000558847 NFE2L3Q9Y4A8 694 aa4.52□□□□□ -1.69
CASC4-206ENST00000558847 ZNF804BA4D1E1 1349 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 A6NNC1 897 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 BTBD18B2RXH4 712 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 ZNF814B7Z6K7 855 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 SH2B2O14492 632 aaPredicted RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 WNT9BO14905 357 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 RGS11O94810 467 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 FGBP02675 491 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 DNTTP04053 509 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 CHRNB1P11230 501 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 IL7RP16871 459 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 PON1P27169 355 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 MMP13P45452 471 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 PPP3CCP48454 512 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 NRIP1P48552 1158 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 ZP1P60852 638 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 MRPS5P82675 430 aaKnown RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 ADORA2A-AS1P86434 159 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 RASA2Q15283 850 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 DUSP6Q16828 381 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 CCDC96Q2M329 555 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 TMEM266Q2M3C6 531 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 MANEAQ5SRI9 462 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 GARNL3Q5VVW2 1013 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 GGNBP1Q5YKI7 109 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 PDXDC1Q6P996 788 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 QSOX2Q6ZRP7 698 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 MRPL10Q7Z7H8 261 aaKnown RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 ARID3BQ8IVW6 561 aaPredicted RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 SLC35F3Q8IY50 421 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 ARFGAP1Q8N6T3 406 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 SYT2Q8N9I0 419 aaPredicted RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 AVL9Q8NBF6 648 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 CCDC191Q8NCU4 936 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 MCUQ8NE86 351 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 C16orf52Q8NHV5 167 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 MSI2Q96DH6 328 aaKnown RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 NUDCD1Q96RS6 583 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 C1QTNF5Q9BXJ0 243 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 AP1M1Q9BXS5 423 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 RABEP2Q9H5N1 569 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.51□□□□□ -1.69
CASC4-206ENST00000558847 CISD1Q9NZ45 108 aaKnown RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 IL36RNQ9UBH0 155 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 NENFQ9UMX5 172 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 PPIEQ9UNP9 301 aaKnown RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 CMAHPQ9Y471 501 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.51□□□□□ -1.69
CASC4-206ENST00000558847 HS3ST3B1Q9Y662 390 aa4.51□□□□□ -1.69
CASC4-206ENST00000558847 MS4A18H0YCH9 400 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 MITFO75030 526 aaPredicted RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 ATG13O75143 517 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 ENTPD3O75355 529 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 GJB3O75712 270 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 TPPPO94811 219 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 ADRB2P07550 413 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 EEF1DP29692 281 aaKnown RBP4.5□□□□□ -1.69
CASC4-206ENST00000558847 ME1P48163 572 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 CXCR3P49682 368 aa4.5□□□□□ -1.69
CASC4-206ENST00000558847 PLCD1P51178 756 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms