RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 DDX3YO15523 660 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 MSI1O43347 362 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 ATP6V1G1O75348 118 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 SMIM10L2AP0DMW4 78 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 SMIM10L2BP0DMW5 78 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 AQP1P29972 269 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 RBM43Q6ZSC3 357 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D21Q8IYX1 336 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 KLHL5Q96PQ7 755 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 TTYH1Q9H313 450 aaPredicted RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 NEXMIFQ5QGS0 1516 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 PAPSS1O43252 624 aaPredicted RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 METTL18O95568 372 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 LTA4HP09960 611 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 CTBP1Q13363 440 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 PDK4Q16654 411 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 LGMNQ99538 433 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 ZNF232Q9UNY5 417 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 CHD1O14646 1710 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 B4GALT5O43286 388 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 KDM4BO94953 1096 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 MT-ND1P03886 318 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 PTPN1P18031 435 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 ATP5F1P24539 256 aaPredicted RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 MTHFRP42898 656 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 EVX2Q03828 476 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 USF2Q15853 346 aaPredicted RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 REPS1Q96D71 796 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 DIRAS2Q96HU8 199 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 KIAA1257Q9ULG3 409 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 TRMUO75648 421 aaKnown RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 AP2S1P53680 142 aaPredicted RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 TRIM40Q6P9F5 258 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 OTOP2Q7RTS6 562 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 IKZF4Q9H2S9 585 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 S100A14Q9HCY8 104 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 TIMMDC1Q9NPL8 285 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 NCAM2O15394 837 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 RENBPP51606 427 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 DEFA5Q01523 94 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 SLC6A3Q01959 620 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 HKDC1Q2TB90 917 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 CDYL2Q8N8U2 506 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 TEX47Q8TBZ9 253 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 TOP1MTQ969P6 601 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 DEFB118Q96PH6 123 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 FCRL4Q96PJ5 515 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 KANSL3Q9P2N6 904 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 GPN3Q9UHW5 284 aaPredicted RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 GNEQ9Y223 722 aaKnown RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 CDC42BPBQ9Y5S2 1711 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 GAS2O43903 313 aaKnown RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 MAGEA2P43356 314 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 ARPC4P59998 168 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 GRIK5Q16478 980 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 OCLNQ16625 522 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 FAM126AQ9BYI3 521 aaPredicted RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 AKAP7Q9P0M2 348 aaPredicted RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 RAB23Q9ULC3 237 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 CNOT6Q9ULM6 557 aaKnown RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 CLTCQ00610 1675 aaKnown RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 A0A075B6Q4 140 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 PRODHO43272 600 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 NTSP30990 170 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 MAN2A2P49641 1150 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 GNA13Q14344 377 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 RUNDC3AQ59EK9 446 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 KCNK18Q7Z418 384 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 TRPV1Q8NER1 839 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 NELL1Q92832 810 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 RERGQ96A58 199 aaPredicted RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 IRAK3Q9Y616 596 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 A2ML1A8K2U0 1454 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 ABCA8O94911 1581 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 CXCL14O95715 111 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 NR2F1P10589 423 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 BRCC3P46736 316 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 NR2C2P49116 596 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 AMPD2Q01433 879 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 PEX6Q13608 980 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 BICRALQ6AI39 1079 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 RP9Q8TA86 221 aaKnown RBP13.97□□□□□ -0.17
SPG11-210ENST00000558319 SLC17A7Q9P2U7 560 aa13.97□□□□□ -0.17
SPG11-210ENST00000558319 PRAMEF33A0A0G2JMD5 474 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 SGTAO43765 313 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 PRAMEF10O60809 474 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 BMP10O95393 424 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 ATP5C1P36542 298 aaKnown RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 RARRES1P49788 294 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 SLC7A2P52569 658 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 PQLC1Q8N2U9 271 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 ZNF433Q8N7K0 673 aaPredicted RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 ART5Q96L15 291 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 SERPINB11Q96P15 392 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 FNDC11Q9BVV2 318 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 C17orf75Q9HAS0 396 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 ADGRE2Q9UHX3 823 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 NUP50Q9UKX7 468 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 ENPP3O14638 875 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 TPST2O60704 377 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms