RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 ZNF518BQ9C0D4 1074 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SHARPINQ9H0F6 387 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 TAS2R9Q9NYW1 312 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SNX5Q9Y5X3 404 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 LRP5O75197 1615 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SLC22A5O76082 557 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SEC24AO95486 1093 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SNRPD2P62316 118 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 PTPN12Q05209 780 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 CDH17Q12864 832 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 ADPRMQ3LIE5 342 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 CDKL4Q5MAI5 379 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 RBM20Q5T481 1227 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 ADGRG3Q86Y34 549 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 DMRTC2Q8IXT2 367 aaPredicted RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 DCAKDQ8WVC6 231 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SGTBQ96EQ0 304 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 NPAS1Q99742 590 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 TM9SF3Q9HD45 589 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SIRPGQ9P1W8 387 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 TRBV23-1A0A0A0MS06 115 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 STMN1P16949 149 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SLC9A1P19634 815 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 MRPS5P82675 430 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 BNC1Q01954 994 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 STXBP2Q15833 593 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 PITRM1Q5JRX3 1037 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 CPNE8Q86YQ8 564 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 GUF1Q8N442 669 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 C18orf25Q96B23 403 aaPredicted RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 TRIM43Q96BQ3 446 aaPredicted RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SIPA1Q96FS4 1042 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 NECTIN4Q96NY8 510 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 TFB2MQ9H5Q4 396 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 MVB12BQ9H7P6 319 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 NOL11Q9H8H0 719 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 GPRC5CQ9NQ84 441 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 EVLQ9UI08 416 aaPredicted RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 ZFR2Q9UPR6 939 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 PPP2R3BQ9Y5P8 575 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 PIAS3Q9Y6X2 628 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SPATA31A6Q5VVP1 1343 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 NIPSNAP2O75323 286 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 PRDM1O75626 825 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 CCNDBP1O95273 360 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 KRT1P04264 644 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 CHRM5P08912 532 aaPredicted RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 IL2RBP14784 551 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 GGT5P36269 586 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 PKNOX1P55347 436 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 KCNC3Q14003 757 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 DGUOKQ16854 277 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 CCNYL2Q5T2Q4 361 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 CRLF3Q8IUI8 442 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 E2F7Q96AV8 911 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 NXNL1Q96CM4 212 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 SPC25Q9HBM1 224 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 STARD7Q9NQZ5 370 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 USP22Q9UPT9 525 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 G3V3G9 751 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 EML1O00423 815 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 MSH3P20585 1137 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 IL12RB1P42701 662 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 LLGL1Q15334 1064 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 RNF148Q8N7C7 305 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 ANKFN1Q8N957 763 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 ZSCAN18Q8TBC5 510 aaPredicted RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 MRPL48Q96GC5 212 aaKnown RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 PAFAH2Q99487 392 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 RAB23Q9ULC3 237 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 COPG1Q9Y678 874 aaKnown RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 PQLC2LA1A4F0 135 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 DENND3A2RUS2 1198 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 FSCN2O14926 492 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 CLDN3O15551 220 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 ZBTB24O43167 697 aaPredicted RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 GABARAPO95166 117 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 P4HBP07237 508 aaKnown RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 ADORA3P0DMS8 318 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 BMP8BP34820 402 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 STAT1P42224 750 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 RFX5P48382 616 aaPredicted RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 P2RY4P51582 365 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 ZNF169Q14929 603 aaPredicted RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 POLD3Q15054 466 aaPredicted RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 ZC3H12BQ5HYM0 836 aaKnown RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 XKRXQ6PP77 449 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 C16orf54Q6UWD8 224 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 BMP8AQ7Z5Y6 402 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 EPHX4Q8IUS5 362 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 OR13J1Q8NGT2 312 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 GTF3AQ92664 365 aaKnown RBP11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 LRRC39Q96DD0 335 aa11.04□□□□□ -0.64
SEMA4B-204ENST00000558065 HS6ST2Q96MM7 605 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms