RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 APOBEC3BQ9UH17 382 aaKnown RBP16.74■□□□□ 0.27
NEK9-211ENST00000557673 PACSIN2Q9UNF0 486 aaPredicted RBP16.74■□□□□ 0.27
NEK9-211ENST00000557673 TENM4Q6N022 2769 aa16.74■□□□□ 0.27
NEK9-211ENST00000557673 hCG_1818297A0A087WSY0 165 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 C16orf96A6NNT2 1141 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 J3KR12 359 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 DFFAO00273 331 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 MUSKO15146 869 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 DDX3YO15523 660 aaKnown RBP16.73■□□□□ 0.27
NEK9-211ENST00000557673 ZSCAN12O43309 604 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 PRAMEF11O60813 436 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 POP4O95707 220 aaKnown RBP16.73■□□□□ 0.27
NEK9-211ENST00000557673 ANXA6P08133 673 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 PEX5P50542 639 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 PAPOLAP51003 745 aaKnown RBP16.73■□□□□ 0.27
NEK9-211ENST00000557673 YPEL5P62699 121 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 SKOR1P84550 965 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 PPP2R5EQ16537 467 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 INO80DQ53TQ3 878 aaPredicted RBP16.73■□□□□ 0.27
NEK9-211ENST00000557673 PRRT3Q5FWE3 981 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 ESRP1Q6NXG1 681 aaKnown RBP16.73■□□□□ 0.27
NEK9-211ENST00000557673 CCDC81Q6ZN84 652 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 REXO1L1PQ8IX06 675 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 TRIM58Q8NG06 486 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 SCG3Q8WXD2 468 aaKnown RBP16.73■□□□□ 0.27
NEK9-211ENST00000557673 HES6Q96HZ4 224 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 KLHL32Q96NJ5 620 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 OSBPL1AQ9BXW6 950 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.73■□□□□ 0.27
NEK9-211ENST00000557673 LHX3Q9UBR4 397 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 UBA2Q9UBT2 640 aaPredicted RBP16.73■□□□□ 0.27
NEK9-211ENST00000557673 KLF15Q9UIH9 416 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 GGT7Q9UJ14 662 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 ITM2BQ9Y287 266 aa16.73■□□□□ 0.27
NEK9-211ENST00000557673 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
NEK9-211ENST00000557673 CCDC187A0A096LP49 1063 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 CDRT15L2A8MXV6 281 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 LMO7DNF2Z398 122 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 TMX2-CTNND1H3BSU7 103 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 APOL1O14791 398 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 INSIG1O15503 277 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 SPINT1O43278 529 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 ZRANB2O95218 330 aaKnown RBP eCLIP16.72■□□□□ 0.27
NEK9-211ENST00000557673 IGSF6O95976 241 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 PTPN7P35236 360 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 RWDD2BP57060 319 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 GBE1Q04446 702 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 GALNT2Q10471 571 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 EIF2B5Q13144 721 aaKnown RBP16.72■□□□□ 0.27
NEK9-211ENST00000557673 SPIDRQ14159 915 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 LY6DQ14210 128 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 CYTH1Q15438 398 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 TFDP3Q5H9I0 405 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 LRRC73Q5JTD7 316 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 C6orf132Q5T0Z8 1188 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 FOXR1Q6PIV2 292 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 GDPD4Q6W3E5 623 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 ARHGAP36Q6ZRI8 547 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 CLEC14AQ86T13 490 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 RFX6Q8HWS3 928 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 CCDC50Q8IVM0 306 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 RCOR2Q8IZ40 523 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 ATPAF2Q8N5M1 289 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 UBL4BQ8N7F7 174 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.72■□□□□ 0.27
NEK9-211ENST00000557673 CAAP1Q9H8G2 361 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 SP110Q9HB58 689 aa16.72■□□□□ 0.27
NEK9-211ENST00000557673 USP27XA6NNY8 438 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 CYSRT1A8MQ03 144 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 TNFSF15O95150 251 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 ITGA2BP08514 1039 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 BLKP51451 505 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 COPS2P61201 443 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 FAXCQ5TGI0 409 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 PHACTR4Q8IZ21 702 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 CENPTQ96BT3 561 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 PRR11Q96HE9 360 aaPredicted RBP16.71■□□□□ 0.27
NEK9-211ENST00000557673 CLMPQ9H6B4 373 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 DTLQ9NZJ0 730 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 PADI4Q9UM07 663 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 DOLKQ9UPQ8 538 aa16.71■□□□□ 0.27
NEK9-211ENST00000557673 A0A1W2PNU3 283 aaPredicted RBP16.7■□□□□ 0.26
NEK9-211ENST00000557673 MAP3K6O95382 1288 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 PIGNO95427 931 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 KRT10P13645 584 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 ZFXP17010 805 aaPredicted RBP16.7■□□□□ 0.26
NEK9-211ENST00000557673 GARSP41250 739 aaKnown RBP16.7■□□□□ 0.26
NEK9-211ENST00000557673 DYNLT1P63172 113 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 PPARDQ03181 441 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 KCNC4Q03721 635 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 RAD51Q06609 339 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 IL10RBQ08334 325 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 EIF3IQ13347 325 aaKnown RBP16.7■□□□□ 0.26
NEK9-211ENST00000557673 TFDP2Q14188 446 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 PERM1Q5SV97 790 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 MEI1Q5TIA1 1274 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 LVRNQ6Q4G3 990 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 CRTC1Q6UUV9 634 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 XKR5Q6UX68 686 aa16.7■□□□□ 0.26
NEK9-211ENST00000557673 MACC1Q6ZN28 852 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms