RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SLC16A12Q6ZSM3 486 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TRAPPC11Q7Z392 1133 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CACNA2D4Q7Z3S7 1137 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 GALNT5Q7Z7M9 940 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 IQCF2Q8IXL9 164 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 RBMXL3Q8N7X1 1067 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 DNAAF1Q8NEP3 725 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 APPL2Q8NEU8 664 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 DENND1AQ8TEH3 1009 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 EME1Q96AY2 570 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PHF21BQ96EK2 531 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 LRRC3BQ96PB8 259 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM47Q9BQJ4 181 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CATSPERBQ9H7T0 1116 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 MAGEE1Q9HCI5 957 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 MED4Q9NPJ6 270 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 NRIP3Q9NQ35 241 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SNX8Q9Y5X2 465 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SESN1Q9Y6P5 492 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 STON1Q9Y6Q2 735 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 FAM237AA0A1B0GTK4 181 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 A0A1B0GVM2 712 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GLOD5A6NK44 160 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TRIM64CA6NLI5 447 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 A6NNC1 897 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 MYO1GB0I1T2 1018 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 HIST1H2ABP04908 130 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 HOXC6P09630 235 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 HIST1H2ADP20671 130 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SSR1P43307 286 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CDH8P55286 799 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GSCP56915 257 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 DSC1Q08554 894 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 RBMS2Q15434 407 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 RAB6CQ53S08 254 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 ARL13AQ5H913 290 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 DNTTIP2Q5QJE6 756 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 FRG2Q64ET8 278 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 KLHL10Q6JEL2 608 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 DPY19L2P1Q6NXN4 242 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF793Q6ZN11 406 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 HIST3H2AQ7L7L0 130 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GSTA5Q7RTV2 222 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GPAT4Q86UL3 456 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CHD1LQ86WJ1 897 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 NRROSQ86YC3 692 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 DHX40Q8IX18 779 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CLIP4Q8N3C7 705 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 AADATQ8N5Z0 425 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SCCPDHQ8NBX0 429 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GTF3C6Q969F1 213 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 ERP27Q96DN0 273 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TEX12Q9BXU0 123 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 RAB6CQ9H0N0 254 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SIL1Q9H173 461 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 MMP25Q9NPA2 562 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 POLG2Q9UHN1 485 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 VPS28Q9UK41 221 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 FBXW11Q9UKB1 542 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 PCDHA7Q9UN72 937 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 LSM4Q9Y4Z0 139 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 A0A1W2PR77 199 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 FSD2A1L4K1 749 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 FAM90A10PA6NDY2 464 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 HSPB2A8KAH6 182 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 STMND1H3BQB6 276 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 VWA5AO00534 786 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SMAD9O15198 467 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 LDB2O43679 373 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 MITFO75030 526 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SLC25A12O75746 678 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 LETM1O95202 739 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GLUD1P00367 558 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TPOP07202 933 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SELLP14151 372 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 MPGP29372 298 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 STIP1P31948 543 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GLUD2P49448 558 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CTCFP49711 727 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 GNAQP50148 359 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 LIMK1P53667 647 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TERF1P54274 439 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 MRPS5P82675 430 aaKnown RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 HSPB2Q16082 182 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 NTRK2Q16620 822 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 DECR1Q16698 335 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 SHROOM1Q2M3G4 852 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-212ENST00000557538 Q4G0T1 1027 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 WASHC2DQ5SRD0 308 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 MANEAQ5SRI9 462 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 ANKRD54Q6NXT1 300 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 FAM122CQ6P4D5 195 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 OTUD6AQ7L8S5 288 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 FAM217AQ8IXS0 508 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 LMNTD2Q8IXW0 634 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 WDTC1Q8N5D0 677 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 CEP76Q8TAP6 659 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 THAP6Q8TBB0 222 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 TRIB2Q92519 343 aa1.75□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF396Q96N95 335 aaPredicted RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms