RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 MRGPRX3Q96LB0 322 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 RIPOR3Q96MK2 946 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 LYSMD1Q96S90 227 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 CIPCQ9C0C6 399 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 EBF3Q9H4W6 596 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 ECT2Q9H8V3 914 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 POLR3BQ9NW08 1133 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 SIRPGQ9P1W8 387 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 MARCH4Q9P2E8 410 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-233ENST00000557529 DEC1Q9P2X7 70 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 C2orf16Q68DN1 1984 aa12.49□□□□□ -0.41
SHMT2-233ENST00000557529 BNIP3LO60238 219 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 EDF1O60869 148 aaKnown RBP12.48□□□□□ -0.41
SHMT2-233ENST00000557529 IL1BP01584 269 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 SLC4A1P02730 911 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 CTPS1P17812 591 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 NFKBIAP25963 317 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 GKP32189 559 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 STC1P52823 247 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 TAS2R39P59534 338 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 ST8SIA6P61647 398 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 POLR2LP62875 67 aaKnown RBP12.48□□□□□ -0.41
SHMT2-233ENST00000557529 FCHO2Q0JRZ9 810 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 ITIH4Q14624 930 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 EIF4HQ15056 248 aaKnown RBP12.48□□□□□ -0.41
SHMT2-233ENST00000557529 TSNAXIP1Q2TAA8 658 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 HECTD2Q5U5R9 776 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 TMEM215Q68D42 235 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 TANGO2Q6ICL3 276 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 FAM45BPQ6NSW5 357 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 Q6ZVU0 165 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 USP45Q70EL2 814 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 LYSMD3Q7Z3D4 306 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 MFSD6LQ8IWD5 586 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 YAF2Q8IY57 180 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 KDM1BQ8NB78 822 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 ACVR1CQ8NER5 493 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 TTC8Q8TAM2 541 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 FAM45AQ8TCE6 357 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHMT2-233ENST00000557529 LRIG1Q96JA1 1093 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 OMDQ99983 421 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 ELAC2Q9BQ52 826 aaKnown RBP12.48□□□□□ -0.41
SHMT2-233ENST00000557529 HEPHQ9BQS7 1158 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 PLCD4Q9BRC7 762 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 ZDHHC6Q9H6R6 413 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 ZFYVE1Q9HBF4 777 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 IL17CQ9P0M4 197 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 TMEM216Q9P0N5 145 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 EMCNQ9ULC0 261 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 PPIL1Q9Y3C6 166 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 CHD7Q9P2D1 2997 aa12.48□□□□□ -0.41
SHMT2-233ENST00000557529 MYOFQ9NZM1 2061 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 C1orf232A0A0U1RR37 186 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 TRIM24O15164 1050 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 PHGDHO43175 533 aaKnown RBP12.47□□□□□ -0.41
SHMT2-233ENST00000557529 SNX3O60493 162 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 NDUFS3O75489 264 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 TOP3BO95985 862 aaKnown RBP12.47□□□□□ -0.41
SHMT2-233ENST00000557529 UGT2B4P06133 528 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 ALPIP09923 528 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 SLC35E2BP0CK96 405 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 BGNP21810 368 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 MC4RP32245 332 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 HNF1BP35680 557 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 SLC26A3P40879 764 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 MTHFRP42898 656 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 TTPAP49638 278 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 PTPN5P54829 565 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 C16orf46Q6P387 395 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 BRAT1Q6PJG6 821 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 VITQ6UXI7 678 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 GDPD4Q6W3E5 623 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 FAM47EQ6ZV65 393 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 SPATA21Q7Z572 469 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 TBC1D1Q86TI0 1168 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-233ENST00000557529 C12orf40Q86WS4 652 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 OR2A12Q8NGT7 310 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 RDH11Q8TC12 318 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 FRS2Q8WU20 508 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 CYB5D2Q8WUJ1 264 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 SREK1Q8WXA9 508 aaKnown RBP12.47□□□□□ -0.41
SHMT2-233ENST00000557529 ZFYVE19Q96K21 471 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 SMIM14Q96QK8 99 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 TSSK1BQ9BXA7 367 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 OSBPL1AQ9BXW6 950 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 S1PR5Q9H228 398 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 ZNF576Q9H609 170 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 NMRAL1Q9HBL8 299 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 HPS4Q9NQG7 708 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 ELOVL2Q9NXB9 296 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 CLEC1BQ9P126 229 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 FKBPLQ9UIM3 349 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 PLA2G4CQ9UP65 541 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 VWA7Q9Y334 891 aa12.47□□□□□ -0.41
SHMT2-233ENST00000557529 USP15Q9Y4E8 981 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-233ENST00000557529 TTC34A8MYJ7 566 aa12.46□□□□□ -0.41
SHMT2-233ENST00000557529 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms