RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PABPC1LQ4VXU2 614 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PRCCQ92733 491 aaPredicted RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 CELF4Q9BZC1 486 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TMPRSS11EQ9UL52 423 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PRAMEF1O95521 474 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 GPIP06744 558 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ELK3P41970 407 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PTPN5P54829 565 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ATP6V0D1P61421 351 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 AIMP2Q13155 320 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF470Q6ECI4 717 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ASB18Q6ZVZ8 466 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 OR2L2Q8NH16 312 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 CIDECQ96AQ7 238 aaPredicted RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SMARCD1Q96GM5 515 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 NXF3Q9H4D5 531 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TM9SF3Q9HD45 589 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PIM2Q9P1W9 311 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SLC27A6Q9Y2P4 619 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 LOC102724428A0A0B4J2F2 783 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PIGNO95427 931 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 DRG2P55039 364 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SIK1P57059 783 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SEC23AQ15436 765 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 GPAT3Q53EU6 434 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 OR2W6PQ8NHA6 318 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 C2orf49Q9BVC5 232 aaPredicted RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 COG5Q9UP83 839 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PTPRTO14522 1441 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 BCKDKO14874 412 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 VNN2O95498 520 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 LTA4HP09960 611 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 DLSTP36957 453 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 CLCN5P51795 746 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 NME5P56597 212 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 MAB21L1Q13394 359 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ILDR2Q71H61 639 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SAMD14Q8IZD0 417 aaPredicted RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 CNDP2Q96KP4 475 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ZSWIM3Q96MP5 696 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 OR5B12Q96R08 314 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PCDH12Q9NPG4 1184 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TBX20Q9UMR3 447 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PLEKHA6Q9Y2H5 1048 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 DNASE1L1P49184 302 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 DDR1Q08345 913 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 GPR107Q5VW38 600 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 OVOS1Q6IE37 1185 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF280DQ6N043 979 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ZDHHC15Q96MV8 337 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SPTBP11277 2137 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ANPEPP15144 967 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 CLK2P49760 499 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 COLEC12Q5KU26 742 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TAPT1Q6NXT6 567 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TOR1AIP2Q8NFQ8 470 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SEC14L1Q92503 715 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 POMKQ9H5K3 350 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TBC1D14Q9P2M4 693 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 URODP06132 367 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 CDH13P55290 713 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SCGB2A2Q13296 93 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 FAM199XQ6PEV8 388 aaPredicted RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TMC7Q7Z402 723 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TCP10LQ8TDR4 215 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ASB15Q8WXK1 588 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SMG7Q92540 1137 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ZKSCAN4Q969J2 545 aaPredicted RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TCEAL4Q96EI5 215 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TUBA1CQ9BQE3 449 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PIF1Q9H611 641 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 CLIC5Q9NZA1 410 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 CPDO75976 1380 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 BTN3A1O00481 513 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 TEX33O43247 280 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 FNBP1LQ5T0N5 605 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 Q8N402 240 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.84□□□□□ -0.994e-8■■■□□ 18.8
SYNE3-205ENST00000557275 KCNN3Q9UGI6 736 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 PNPLA7Q6ZV29 1317 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 BTBD19C9JJ37 291 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 RPLP0P05388 317 aaKnown RBP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ADORA1P30542 326 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 FXR1P51114 621 aaKnown RBP eCLIP8.84□□□□□ -0.99
SYNE3-205ENST00000557275 FRRS1Q6ZNA5 592 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 SKA3Q8IX90 412 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 ATG4AQ8WYN0 398 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 AKAP6Q13023 2319 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 RGS19P49795 217 aa8.84□□□□□ -1
SYNE3-205ENST00000557275 MOXD1Q6UVY6 613 aa8.84□□□□□ -1
SYNE3-205ENST00000557275 TC2NQ8N9U0 490 aa8.84□□□□□ -1
SYNE3-205ENST00000557275 SMPD3Q9NY59 655 aaPredicted RBP8.84□□□□□ -1
SYNE3-205ENST00000557275 PCDHGC3Q9UN70 934 aa8.84□□□□□ -1
SYNE3-205ENST00000557275 SMAD1Q15797 465 aaKnown RBP8.83□□□□□ -1
SYNE3-205ENST00000557275 MAPK14Q16539 360 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 BCL2A1Q16548 175 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 COL28A1Q2UY09 1125 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 LIPMQ5VYY2 423 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 FAM91A1Q658Y4 838 aa8.83□□□□□ -1
SYNE3-205ENST00000557275 ZNF730Q6ZMV8 503 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms