RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CLMPQ9H6B4 373 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 CAAP1Q9H8G2 361 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 DNAI1Q9UI46 699 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 GGT7Q9UJ14 662 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 APPL1Q9UKG1 709 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 NEU3Q9UQ49 428 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 FHOD1Q9Y613 1164 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 ACTL7AQ9Y615 435 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 DGKBQ9Y6T7 804 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 D6RAR5 112 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 F8VZ95 297 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 FAM72CH0Y354 149 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 TMCC1O94876 653 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 MMEP08473 750 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 CTSEP14091 401 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 EEF1GP26641 437 aaKnown RBP8.73□□□□□ -1.01
VRK1-206ENST00000557222 GKP32189 559 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 HTR7P34969 479 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 UGT1A5P35504 534 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 CSNK1DP48730 415 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 CDR2Q01850 454 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 C1orf61Q13536 156 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 LY6DQ14210 128 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 NFATC4Q14934 902 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 KLHL40Q2TBA0 621 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 PARP15Q460N3 678 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 FAM72AQ5TYM5 149 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 TAF3Q5VWG9 929 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 NAA35Q5VZE5 725 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 FAM72DQ6L9T8 149 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 BRAT1Q6PJG6 821 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 OGFOD3Q6PK18 319 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 RAB11FIP2Q7L804 512 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 FAM72BQ86X60 149 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 RTL3Q8N8U3 475 aaKnown RBP8.73□□□□□ -1.01
VRK1-206ENST00000557222 OR6K2Q8NGY2 324 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 SGF29Q96ES7 293 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 ZNF641Q96N77 438 aaPredicted RBP8.73□□□□□ -1.01
VRK1-206ENST00000557222 TUBGCP5Q96RT8 1024 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 SEMA3CQ99985 751 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 APOOQ9BUR5 198 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 MBNL1Q9NR56 388 aaKnown RBP8.73□□□□□ -1.01
VRK1-206ENST00000557222 METTL5Q9NRN9 209 aaKnown RBP8.73□□□□□ -1.01
VRK1-206ENST00000557222 NOCTQ9UK39 431 aaKnown RBP8.73□□□□□ -1.01
VRK1-206ENST00000557222 PNMA8BQ9ULN7 279 aaPredicted RBP8.73□□□□□ -1.01
VRK1-206ENST00000557222 GPR34Q9UPC5 381 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 ITM2BQ9Y287 266 aa8.73□□□□□ -1.01
VRK1-206ENST00000557222 TNFRSF10CO14798 259 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 WISP1O95388 367 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 TNFP01375 233 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 KRT3P12035 628 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 GLB1P16278 677 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 XPAP23025 273 aaPredicted RBP8.72□□□□□ -1.01
VRK1-206ENST00000557222 KELP23276 732 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 CD82P27701 267 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 SLC5A2P31639 672 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 HDAC4P56524 1084 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 SRP54P61011 504 aaKnown RBP8.72□□□□□ -1.01
VRK1-206ENST00000557222 RHOAP61586 193 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 CCL7P80098 99 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 ZFP36L1Q07352 338 aaKnown RBP8.72□□□□□ -1.01
VRK1-206ENST00000557222 MTM1Q13496 603 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 SERINC3Q13530 473 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 IRF4Q15306 451 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 CAMK4Q16566 473 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 CLPPQ16740 277 aaPredicted RBP8.72□□□□□ -1.01
VRK1-206ENST00000557222 UGP2Q16851 508 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 CDO1Q16878 200 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 C15orf59Q2T9L4 293 aaPredicted RBP8.72□□□□□ -1.01
VRK1-206ENST00000557222 ALG11Q2TAA5 492 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 WSCD2Q2TBF2 565 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 C2CD6Q53TS8 623 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 ATXN7L2Q5T6C5 722 aaPredicted RBP8.72□□□□□ -1.01
VRK1-206ENST00000557222 ERAP2Q6P179 960 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 SLFN11Q7Z7L1 901 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 DNAAF5Q86Y56 855 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 HID1Q8IV36 788 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 UMODL1-AS1Q8N2C9 162 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 EMC1Q8N766 993 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 GPR156Q8NFN8 814 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 PCDH19Q8TAB3 1148 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 CCDC74AQ96AQ1 378 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 HMCESQ96FZ2 354 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 RBM15Q96T37 977 aaKnown RBP eCLIP8.72□□□□□ -1.01
VRK1-206ENST00000557222 RBSNQ9H1K0 784 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 LRRN3Q9H3W5 708 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 NOL6Q9H6R4 1146 aaKnown RBP8.72□□□□□ -1.01
VRK1-206ENST00000557222 CATSPERBQ9H7T0 1116 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 KCTD5Q9NXV2 234 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 SEPT10Q9P0V9 454 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 GULP1Q9UBP9 304 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 COL12A1Q99715 3063 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 LRRK2Q5S007 2527 aa8.72□□□□□ -1.01
VRK1-206ENST00000557222 A0A1W2PQC6 194 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 A0A1W2PQM1 296 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 SIGLEC16A6NMB1 481 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 EIF3CLB5ME19 914 aaKnown RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 RASA4BC9J798 803 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 PDE2AO00408 941 aaPredicted RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 FGF10O15520 208 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms