RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	ST8SIA6	P61647	398 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	KLF10	Q13118	480 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	DHX8	Q14562	1220 aa	Known RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CDKN3	Q16667	212 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	BMT2	Q1RMZ1	405 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	TCTN3	Q6NUS6	607 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	RSRC2	Q7L4I2	434 aa	Known RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	RAB11FIP2	Q7L804	512 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	TRAPPC11	Q7Z392	1133 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	SCD5	Q86SK9	330 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	TRIM69	Q86WT6	500 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	WDR49	Q8IV35	697 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	MMAA	Q8IVH4	418 aa	Known RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	FUK	Q8N0W3	1084 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	AADAT	Q8N5Z0	425 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	NECAB1	Q8N987	351 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	FBXO18	Q8NFZ0	1043 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	GTF3C6	Q969F1	213 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	TMEM159	Q96B96	161 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	SAAL1	Q96ER3	474 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CDK5RAP3	Q96JB5	506 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	LMLN	Q96KR4	655 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CATSPER2	Q96P56	530 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	ACCS	Q96QU6	501 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	MED10	Q9BTT4	135 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	STRADB	Q9C0K7	418 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	IKZF4	Q9H2S9	585 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	PNPLA8	Q9NP80	782 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	KCND1	Q9NSA2	647 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	ABCB8	Q9NUT2	735 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	CYTH4	Q9UIA0	394 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZFP69B	Q9UJL9	534 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	GGA2	Q9UJY4	613 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	NOL7	Q9UMY1	257 aa	Known RBP	4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	KIF26B	Q2KJY2	2108 aa		4.85	□□□□□ -1.63
SCFD1-223	ENST00000557076	DNHD1	Q96M86	4753 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	GOLGA8IP	A6NC78	632 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	GOLGA8J	A6NMD2	632 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	MTSS1	O43312	755 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	PLRG1	O43660	514 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	JAK2	O60674	1132 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	TBCA	O75347	108 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	VPS4B	O75351	444 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	CSF2	P04141	144 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	ASL	P04424	464 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	SRPRA	P08240	638 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	ENO2	P09104	434 aa	Predicted RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	FAH	P16930	419 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	DRD3	P35462	400 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	MAP3K7CL	P57077	242 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	TNNC1	P63316	161 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	GUCY1B3	Q02153	619 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	KLRB1	Q12918	225 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	SPIDR	Q14159	915 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	ME3	Q16798	604 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	SETMAR	Q53H47	684 aa	Predicted RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	MIIP	Q5JXC2	388 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	L1TD1	Q5T7N2	865 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	MRM1	Q6IN84	353 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	NEK5	Q6P3R8	708 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	GUSBP11	Q6P575	273 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	CCDC186	Q7Z3E2	898 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	SRRM1	Q8IYB3	904 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	SLC34A3	Q8N130	599 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	GPD1L	Q8N335	351 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZNF557	Q8N988	423 aa	Predicted RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	FIBIN	Q8TAL6	211 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	UHMK1	Q8TAS1	419 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	NAT6	Q93015	286 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	C8orf76	Q96K31	380 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	AK8	Q96MA6	479 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	CBWD1	Q9BRT8	395 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	BOC	Q9BWV1	1114 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	JAM3	Q9BX67	310 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZHX3	Q9H4I2	956 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	MTG2	Q9H4K7	406 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	KIAA1586	Q9HCI6	787 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	BLOC1S4	Q9NUP1	217 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	SEL1L	Q9UBV2	794 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	VPS4A	Q9UN37	437 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	ZFR2	Q9UPR6	939 aa	Known RBP	4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	KIF3A	Q9Y496	699 aa		4.84	□□□□□ -1.63
SCFD1-223	ENST00000557076	SVIL	O95425	2214 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	EDDM13	A0A1B0GTR0	161 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	SLC31A1	O15431	190 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	FOXS1	O43638	330 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	RTN2	O75298	545 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	NEBL	O76041	1014 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	LATS1	O95835	1130 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	IL1B	P01584	269 aa		4.83	□□□□□ -1.64
SCFD1-223	ENST00000557076	KRT18	P05783	430 aa	Known RBP	4.83	□□□□□ -1.64

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