RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ERP44Q9BS26 406 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 TXLNGYQ9BZA5 131 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 ROPN1BQ9BZX4 212 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-246ENST00000557030 CIPCQ9C0C6 399 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 DDX47Q9H0S4 455 aaKnown RBP4.89□□□□□ -1.63
ATXN3-246ENST00000557030 PABPC3Q9H361 631 aaKnown RBP4.89□□□□□ -1.63
ATXN3-246ENST00000557030 ROPN1Q9HAT0 212 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-246ENST00000557030 NOD2Q9HC29 1040 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 HEYLQ9NQ87 328 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-246ENST00000557030 STARD7Q9NQZ5 370 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 HOMER3Q9NSC5 361 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 HAUS2Q9NVX0 235 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 MTMR4Q9NYA4 1195 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 DKK4Q9UBT3 224 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 DDX25Q9UHL0 483 aaKnown RBP4.89□□□□□ -1.63
ATXN3-246ENST00000557030 PCDHA12Q9UN75 941 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 PACSIN2Q9UNF0 486 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-246ENST00000557030 SLC12A4Q9UP95 1085 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 PFASO15067 1338 aa4.89□□□□□ -1.63
ATXN3-246ENST00000557030 ZNF646O15015 1829 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 GREB1LQ9C091 1923 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 ABHD14A-ACY1A0A1B0GW23 586 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 H7C1Q1 480 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TTI1O43156 1089 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 SLC37A4O43826 429 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 LUC7L3O95232 432 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TDP2O95551 362 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 FGGP02679 453 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 CHN1P15882 459 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 CREB1P16220 341 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 GAP43P17677 238 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 CYP11B2P19099 503 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 NR2F2P24468 414 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 PON1P27169 355 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TMOD1P28289 359 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 HADHBP55084 474 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TIAL1Q01085 375 aaKnown RBP eCLIP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 POU5F1Q01860 360 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 MAPK7Q13164 816 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 GRM1Q13255 1194 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 PPP1R7Q15435 360 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 KNOP1Q1ED39 458 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 RNASE12Q5GAN4 147 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 KIAA1755Q5JYT7 1200 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 GPATCH4Q5T3I0 446 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 PRAMEF17Q5VTA0 474 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 ZNF425Q6IV72 752 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 APOBEC3HQ6NTF7 200 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 C11orf63Q6NUN7 778 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 HIBCHQ6NVY1 386 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TLDC1Q6P9B6 456 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 C1orf228Q6PIY5 440 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 KIRREL2Q6UWL6 708 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 SERPINA13PQ6UXR4 307 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TRIM72Q6ZMU5 477 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TRPM8Q7Z2W7 1104 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 PIGWQ7Z7B1 504 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 NELFCDQ8IXH7 590 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TERB1Q8NA31 727 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 ATP11CQ8NB49 1132 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 ATP8B4Q8TF62 1192 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 U2AF1L4Q8WU68 220 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 SCFD1Q8WVM8 642 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 KIAA1191Q96A73 305 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 DAZAP1Q96EP5 407 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 ZNF317Q96PQ6 595 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 SELENOSQ9BQE4 189 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 AP1M1Q9BXS5 423 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 TRIM6Q9C030 488 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 MAF1Q9H063 256 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 NEUROG2Q9H2A3 272 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 FAM83DQ9H4H8 585 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 JMJD4Q9H9V9 463 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 EBF2Q9HAK2 575 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 VAT1LQ9HCJ6 419 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 INTS9Q9NV88 658 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 CNOT8Q9UFF9 292 aaKnown RBP4.88□□□□□ -1.63
ATXN3-246ENST00000557030 AMACRQ9UHK6 382 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 MTUS1Q9ULD2 1270 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 PCDHAC2Q9Y5I4 1007 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 UBE4BO95155 1302 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 MYO3BQ8WXR4 1341 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 SIPA1L1O43166 1804 aa4.88□□□□□ -1.63
ATXN3-246ENST00000557030 PCNTO95613 3336 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 CYP3A7-CYP3A51PA0A087WV96 503 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 PRRT4C9JH25 899 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 E7ENQ6 273 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 APOL1O14791 398 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 RASGRF2O14827 1237 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 EIF3DO15371 548 aaKnown RBP eCLIP4.87□□□□□ -1.63
ATXN3-246ENST00000557030 SPRY2O43597 315 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 TBCAO75347 108 aaKnown RBP4.87□□□□□ -1.63
ATXN3-246ENST00000557030 ATP5HO75947 161 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 VIMP08670 466 aaKnown RBP4.87□□□□□ -1.63
ATXN3-246ENST00000557030 MMP10P09238 476 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 RARGP13631 454 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 ALADP13716 330 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 NQO1P15559 274 aaKnown RBP4.87□□□□□ -1.63
ATXN3-246ENST00000557030 CYP3A7P24462 503 aa4.87□□□□□ -1.63
ATXN3-246ENST00000557030 MAN1A1P33908 653 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms