RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 SYT12Q8IV01 421 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 SLC41A1Q8IVJ1 513 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 PDCD7Q8N8D1 485 aaKnown RBP16.47■□□□□ 0.23
PCNX4-213ENST00000556907 FAM174AQ8TBP5 190 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 CXorf40AQ8TE69 158 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 PIH1D2Q8WWB5 315 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 BIRC7Q96CA5 298 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 IFT43Q96FT9 208 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 SERPINB12Q96P63 405 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 MCCC1Q96RQ3 725 aaPredicted RBP16.47■□□□□ 0.23
PCNX4-213ENST00000556907 CHKBQ9Y259 395 aa16.47■□□□□ 0.23
PCNX4-213ENST00000556907 A0A1W2PQU0 124 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 ANKRD66B4E2M5 251 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 PSMD11O00231 422 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 FOXD2O60548 495 aaPredicted RBP16.46■□□□□ 0.23
PCNX4-213ENST00000556907 PRLP01236 227 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 IGHV4-34P06331 123 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 MMP12P39900 470 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 PTGER3P43115 390 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 SARNPP82979 210 aaKnown RBP16.46■□□□□ 0.23
PCNX4-213ENST00000556907 SLMAPQ14BN4 828 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 TMEM259Q4ZIN3 620 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 NAPEPLDQ6IQ20 393 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 CENPUQ71F23 418 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 DPPA4Q7L190 304 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 ZSWIM9Q86XI8 627 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 RGL4Q8IZJ4 473 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.46■□□□□ 0.23
PCNX4-213ENST00000556907 LYSMD1Q96S90 227 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 C1QTNF7Q9BXJ2 289 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 PILRBQ9UKJ0 227 aa16.46■□□□□ 0.23
PCNX4-213ENST00000556907 TRPM6Q9BX84 2022 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 A0A0J9YYE9 177 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 LOC285095A0A1B0GVY8 99 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 TM7SF2O76062 418 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 NDST3O95803 873 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 MT-CYBP00156 380 aaPredicted RBP16.45■□□□□ 0.22
PCNX4-213ENST00000556907 TRBC1P01850 177 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 PDHA1P08559 390 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 ZNF30P17039 623 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 VIPR1P32241 457 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 ADRA1AP35348 466 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 WNT3AP56704 352 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 FAM193AP78312 1265 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 CREB5Q02930 508 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 SGCGQ13326 291 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 IHHQ14623 411 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 AGERQ15109 404 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 ZNF284Q2VY69 593 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 LRRC8BQ6P9F7 803 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 LINC00523Q86TU6 105 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 CAND1Q86VP6 1230 aaKnown RBP16.45■□□□□ 0.22
PCNX4-213ENST00000556907 PDIK1LQ8N165 341 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 SPATA22Q8NHS9 363 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 SKA1Q96BD8 255 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 LENG8Q96PV6 779 aaPredicted RBP16.45■□□□□ 0.22
PCNX4-213ENST00000556907 TRIB3Q96RU7 358 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 C1QTNF2Q9BXJ5 285 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 FSD1LQ9BXM9 530 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 SLC17A9Q9BYT1 436 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 CASS4Q9NQ75 786 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 NCDNQ9UBB6 729 aa16.45■□□□□ 0.22
PCNX4-213ENST00000556907 A0A1B0GTW7 788 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 PRR23AA6NEV1 266 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 PRAMEF26H0Y7S4 382 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 GOLGA8MH3BSY2 632 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 AP3B1O00203 1094 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 SPINT1O43278 529 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 PMPCBO75439 489 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 HLA-DPA1P20036 260 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 ITPKAP23677 461 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 PPP2CBP62714 309 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 RACK1P63244 317 aaKnown RBP16.44■□□□□ 0.22
PCNX4-213ENST00000556907 PPP2CAP67775 309 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 DHX9Q08211 1270 aaKnown RBP16.44■□□□□ 0.22
PCNX4-213ENST00000556907 ARHGEF7Q14155 803 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 LPAL2Q16609 132 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 DUOXA1Q1HG43 343 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 DNAJC21Q5F1R6 531 aaKnown RBP16.44■□□□□ 0.22
PCNX4-213ENST00000556907 CCDC25Q86WR0 208 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 DEFB119Q8N690 84 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 LPCAT1Q8NF37 534 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 SNX19Q92543 992 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 PIGKQ92643 395 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 RMDN1Q96DB5 314 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 LRRC39Q96DD0 335 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 MRGPRX2Q96LB1 330 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 PWWP2AQ96N64 755 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 TBL1YQ9BQ87 522 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 MAGEE1Q9HCI5 957 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 B4GALT6Q9UBX8 382 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 RAPGEFL1Q9UHV5 662 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 EIF2B4Q9UI10 523 aaKnown RBP16.44■□□□□ 0.22
PCNX4-213ENST00000556907 ZFR2Q9UPR6 939 aaKnown RBP16.44■□□□□ 0.22
PCNX4-213ENST00000556907 TNRC6BQ9UPQ9 1833 aaKnown RBP16.44■□□□□ 0.22
PCNX4-213ENST00000556907 PLXNA2O75051 1894 aa16.44■□□□□ 0.22
PCNX4-213ENST00000556907 SDK1Q7Z5N4 2213 aa16.43■□□□□ 0.22
PCNX4-213ENST00000556907 CAPN8A6NHC0 703 aa16.43■□□□□ 0.22
PCNX4-213ENST00000556907 TOR1BO14657 336 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms