RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 CDCP2Q5VXM1 449 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 ALG1LQ6GMV1 187 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 GUSBP11Q6P575 273 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 LRRC69Q6ZNQ3 347 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 TAF8Q7Z7C8 310 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 CPNE8Q86YQ8 564 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 SLC35F3Q8IY50 421 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 RAVER1Q8IY67 606 aaKnown RBP10.8□□□□□ -0.68
XRCC3-216ENST00000556682 CBARPQ8N350 705 aaPredicted RBP10.8□□□□□ -0.68
XRCC3-216ENST00000556682 PIH1D2Q8WWB5 315 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 DTD2Q96FN9 168 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 NSMCE3Q96MG7 304 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 MCCC1Q96RQ3 725 aaPredicted RBP10.8□□□□□ -0.68
XRCC3-216ENST00000556682 RBM15Q96T37 977 aaKnown RBP eCLIP10.8□□□□□ -0.68
XRCC3-216ENST00000556682 BRD8Q9H0E9 1235 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 CAAP1Q9H8G2 361 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 GOLGA6AQ9NYA3 693 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 DTLQ9NZJ0 730 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 PNMA8BQ9ULN7 279 aaPredicted RBP10.8□□□□□ -0.68
XRCC3-216ENST00000556682 RPL26L1Q9UNX3 145 aaKnown RBP10.8□□□□□ -0.68
XRCC3-216ENST00000556682 GPR34Q9UPC5 381 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 HEY1Q9Y5J3 304 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 U3KQA8 63 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 KNTC1P50748 2209 aa10.8□□□□□ -0.68
XRCC3-216ENST00000556682 TP53BP1Q12888 1972 aaPredicted RBP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 A0A0J9YYE9 177 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 TMEM202A6NGA9 273 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 NPIPB15A6NHN6 443 aaPredicted RBP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 PPP1R12AO14974 1030 aaPredicted RBP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 FZD6O60353 706 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 CSO75390 466 aaKnown RBP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 TRBC1P01850 177 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 KRT1P04264 644 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 TNNT1P13805 278 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 CTPS1P17812 591 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 GM2AP17900 193 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 TEAD1P28347 426 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 CYLC1P35663 651 aaPredicted RBP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 ETV3P41162 512 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 GPR1P46091 355 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 DSC2Q02487 901 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 DPTQ07507 201 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 AP1B1Q10567 949 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 TFDP2Q14188 446 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 LRRC66Q68CR7 880 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 SLC9A4Q6AI14 798 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 RAET1GQ6H3X3 334 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 RBM44Q6ZP01 1051 aaKnown RBP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 Q6ZVL8 140 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 HSD11B1LQ7Z5J1 315 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 NLRP8Q86W28 1048 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 RFX6Q8HWS3 928 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 CCDC170Q8IYT3 715 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 FAM46DQ8NEK8 389 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 OR1E3Q8WZA6 343 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 FGF11Q92914 225 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 TDRD1Q9BXT4 1180 aaKnown RBP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 TEX101Q9BY14 249 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 ADGRE3Q9BY15 652 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 PCDH9Q9HC56 1237 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 CYP4F12Q9HCS2 524 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 SIRPGQ9P1W8 387 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 CHKBQ9Y259 395 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.79□□□□□ -0.68
XRCC3-216ENST00000556682 GPSM3Q9Y4H4 160 aa10.79□□□□□ -0.68
XRCC3-216ENST00000556682 GOLGA4Q13439 2230 aaKnown RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 ARID1BQ8NFD5 2236 aaPredicted RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 PLXNB3Q9ULL4 1909 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 PTPRBP23467 1997 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 PRSS38A1L453 326 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 TMX2-CTNND1H3BSU7 103 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 KCNK1O00180 336 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 ZW10O43264 779 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 PSTPIP1O43586 416 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 USP12O75317 370 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 IPO7O95373 1038 aaKnown RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 HLA-DQB2P05538 268 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 CELA2BP08218 269 aaPredicted RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 PDHA1P08559 390 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 COMTP21964 271 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 TGM2P21980 687 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 LHCGRP22888 699 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 NR2C2P49116 596 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 IFI35P80217 286 aaPredicted RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 CDK3Q00526 305 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 ILF3Q12906 894 aaKnown RBP eCLIP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 SLC10A2Q12908 348 aaPredicted RBP10.78□□□□□ -0.68
XRCC3-216ENST00000556682 SPIDRQ14159 915 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 TCEA2Q15560 299 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 ISXQ2M1V0 245 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 ZNF765Q7L2R6 523 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 TECPR1Q7Z6L1 1165 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 TSPAN33Q86UF1 283 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 HEATR4Q86WZ0 1026 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 NRSN1Q8IZ57 195 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 PLD5Q8N7P1 536 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 TC2NQ8N9U0 490 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 ARRDC2Q8TBH0 407 aa10.78□□□□□ -0.68
XRCC3-216ENST00000556682 KIAA1524Q8TCG1 905 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms