RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 SKIDA1Q1XH10 827 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 ERCC6LQ2NKX8 1250 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 CCDC38Q502W7 563 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 SETMARQ53H47 684 aaPredicted RBP12.52□□□□□ -0.41
ABCD4-225ENST00000556517 LIPIQ6XZB0 460 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 TSPAN33Q86UF1 283 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 TRIM69Q86WT6 500 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 HORMAD1Q86X24 394 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 CCNJLQ8IV13 435 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
ABCD4-225ENST00000556517 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
ABCD4-225ENST00000556517 EIF1ADQ8N9N8 165 aaKnown RBP12.52□□□□□ -0.41
ABCD4-225ENST00000556517 CADM4Q8NFZ8 388 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 GAB3Q8WWW8 586 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 FOXJ1Q92949 421 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 STAMBPL1Q96FJ0 436 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 PRRX2Q99811 253 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 PHACTR1Q9C0D0 580 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 CDH19Q9H159 772 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 ZSCAN32Q9NX65 697 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 SYBUQ9NX95 663 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 NFU1Q9UMS0 254 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 INVSQ9Y283 1065 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 TCAF1Q9Y4C2 921 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 PCDHGA2Q9Y5H1 932 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 ARL5AQ9Y689 179 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 TTC28Q96AY4 2481 aa12.52□□□□□ -0.41
ABCD4-225ENST00000556517 RGSL1A5PLK6 1076 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 IGLON5A6NGN9 336 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 TP73O15350 636 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 SPINT1O43278 529 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 FSBPO95073 299 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 POLBP06746 335 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 SP9P0CG40 484 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 MAT2AP31153 395 aaKnown RBP12.51□□□□□ -0.41
ABCD4-225ENST00000556517 NUDT1P36639 197 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 CARSP49589 748 aaKnown RBP12.51□□□□□ -0.41
ABCD4-225ENST00000556517 CCR5P51681 352 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 STC1P52823 247 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 CRADDP78560 199 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 DHX9Q08211 1270 aaKnown RBP12.51□□□□□ -0.41
ABCD4-225ENST00000556517 PTPRRQ15256 657 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 TRADDQ15628 312 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 ELF2Q15723 593 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 FNBP1LQ5T0N5 605 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 SEL1L3Q68CR1 1132 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 KIAA0895LQ68EN5 471 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 ZC3H14Q6PJT7 736 aaKnown RBP12.51□□□□□ -0.41
ABCD4-225ENST00000556517 ZDHHC24Q6UX98 284 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 CEP68Q76N32 757 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 LPCAT2Q7L5N7 544 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 TMC3Q7Z5M5 1100 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 RAVER1Q8IY67 606 aaKnown RBP12.51□□□□□ -0.41
ABCD4-225ENST00000556517 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.51□□□□□ -0.41
ABCD4-225ENST00000556517 SNX19Q92543 992 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 PEX13Q92968 403 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 NUS1Q96E22 293 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 SMIM14Q96QK8 99 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 ANKZF1Q9H8Y5 726 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 ZDHHC18Q9NUE0 388 aa12.51□□□□□ -0.41
ABCD4-225ENST00000556517 MROH6A6NGR9 719 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
ABCD4-225ENST00000556517 DLL1O00548 723 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 AURKAO14965 403 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 LDB2O43679 373 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 RECQL5O94762 991 aaPredicted RBP12.5□□□□□ -0.41
ABCD4-225ENST00000556517 TTC4O95801 387 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 PGAM1P18669 254 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 ETV3P41162 512 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 PPP2CBP62714 309 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 PPP2CAP67775 309 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 PRAMEP78395 509 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 PTSQ03393 145 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 ZNF284Q2VY69 593 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 TMEM259Q4ZIN3 620 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 HSD11B1LQ7Z5J1 315 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 NRSN1Q8IZ57 195 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 TTC30BQ8N4P2 665 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 OR4K2Q8NGD2 314 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 PYROXD1Q8WU10 500 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 STYXQ8WUJ0 223 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 DTD2Q96FN9 168 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 PLEKHG4BQ96PX9 1271 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 C19orf43Q9BQ61 176 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 SLC17A9Q9BYT1 436 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 C6orf106Q9H6K1 298 aaPredicted RBP12.5□□□□□ -0.41
ABCD4-225ENST00000556517 MRM3Q9HC36 420 aaKnown RBP12.5□□□□□ -0.41
ABCD4-225ENST00000556517 SAYSD1Q9NPB0 183 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 CHRAC1Q9NRG0 131 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 ZC3H7BQ9UGR2 993 aaKnown RBP12.5□□□□□ -0.41
ABCD4-225ENST00000556517 APPL1Q9UKG1 709 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 SOX13Q9UN79 622 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 CHMP2BQ9UQN3 213 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 FNDC3AQ9Y2H6 1198 aaKnown RBP12.5□□□□□ -0.41
ABCD4-225ENST00000556517 RPS6KL1Q9Y6S9 549 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 ATG2BQ96BY7 2078 aa12.5□□□□□ -0.41
ABCD4-225ENST00000556517 ANKRD36A6QL64 1941 aa12.49□□□□□ -0.41
ABCD4-225ENST00000556517 A0A0U1RQS6 177 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms