RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SSC4DQ8WTU2 575 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 RTP4Q96DX8 246 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 ZNF641Q96N77 438 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-219ENST00000556432 MAGEB5Q9BZ81 275 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 PRDM8Q9NQV8 689 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 PHPT1Q9NRX4 125 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-219ENST00000556432 UBA2Q9UBT2 640 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-219ENST00000556432 TMEM59LQ9UK28 342 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 KCTD3Q9Y597 815 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 GOLGA6CA6NDK9 693 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 GOLGA6BA6NDN3 693 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 TTLL8A6PVC2 850 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 RASA4BC9J798 803 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 PPM1DO15297 605 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 RASA4O43374 803 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 HOXC4P09017 264 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-219ENST00000556432 GOLGA6DP0CG33 693 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 MYCLP1P12525 358 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-219ENST00000556432 EPHB2P29323 1055 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 SERPINA4P29622 427 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 CDH5P33151 784 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-219ENST00000556432 ABHD18Q0P651 414 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 PEX6Q13608 980 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 RAPGEF1Q13905 1077 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 CYTH1Q15438 398 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 PNCKQ6P2M8 343 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 TMEM71Q6P5X7 295 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 CEACAM20Q6UY09 585 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 LIPIQ6XZB0 460 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 C17orf82Q86X59 251 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-219ENST00000556432 ZSWIM9Q86XI8 627 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 ZNF761Q86XN6 746 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-219ENST00000556432 NRROSQ86YC3 692 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 CCDC185Q8N715 623 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 RTL3Q8N8U3 475 aaKnown RBP13.94□□□□□ -0.18
ACTN1-219ENST00000556432 CPA5Q8WXQ8 436 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 NOL6Q9H6R4 1146 aaKnown RBP13.94□□□□□ -0.18
ACTN1-219ENST00000556432 ATP13A3Q9H7F0 1226 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 GOLGA6AQ9NYA3 693 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 NEU3Q9UQ49 428 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 PCDHB3Q9Y5E6 796 aa13.94□□□□□ -0.18
ACTN1-219ENST00000556432 CFAP69A5D8W1 941 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 K7EM74 188 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 BUB1BO60566 1050 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-219ENST00000556432 STK17BO94768 372 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 LSM8O95777 96 aaKnown RBP13.93□□□□□ -0.18
ACTN1-219ENST00000556432 CYP11B1P15538 503 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 BMP6P22004 513 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 TRIM23P36406 574 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 RALGDSQ12967 914 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 NAA35Q5VZE5 725 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 CAPRIN2Q6IMN6 1127 aaKnown RBP13.93□□□□□ -0.18
ACTN1-219ENST00000556432 CCDC13Q8IYE1 715 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 FAM71AQ8IYT1 594 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 PELI3Q8N2H9 469 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 OR10G6Q8NH81 332 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 RXFP2Q8WXD0 754 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 NUS1Q96E22 293 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 TUBGCP5Q96RT8 1024 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 TRIT1Q9H3H1 467 aaKnown RBP13.93□□□□□ -0.18
ACTN1-219ENST00000556432 TRNAU1APQ9NX07 287 aaKnown RBP13.93□□□□□ -0.18
ACTN1-219ENST00000556432 SUFUQ9UMX1 484 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 MRPS18BQ9Y676 258 aaKnown RBP13.93□□□□□ -0.18
ACTN1-219ENST00000556432 KCNMB2Q9Y691 235 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 CACNA1DQ01668 2161 aa13.93□□□□□ -0.18
ACTN1-219ENST00000556432 CREB3O43889 395 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 ERCC5P28715 1186 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-219ENST00000556432 ACTR1BP42025 376 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 YBEYP58557 167 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-219ENST00000556432 ACTR1AP61163 376 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 GPLD1P80108 840 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 CTBSQ01459 385 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 MC2RQ01718 297 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 PARP15Q460N3 678 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 CCDC14Q49A88 953 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 DENND2CQ68D51 928 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 TCTN3Q6NUS6 607 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 DOK6Q6PKX4 331 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 ARCQ7LC44 396 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 TIPARPQ7Z3E1 657 aaKnown RBP13.92□□□□□ -0.18
ACTN1-219ENST00000556432 NAGSQ8N159 534 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 BMPERQ8N8U9 685 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 GALNT11Q8NCW6 608 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 GPT2Q8TD30 523 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 FAM172AQ8WUF8 416 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 RNF31Q96EP0 1072 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 TIGD1Q96MW7 591 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 SLC38A3Q99624 504 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 ZPBPQ9BS86 351 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 SIX2Q9NPC8 291 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 RPS6KL1Q9Y6S9 549 aa13.92□□□□□ -0.18
ACTN1-219ENST00000556432 ANKRD17O75179 2603 aaKnown RBP13.92□□□□□ -0.18
ACTN1-219ENST00000556432 TRBV23OR9-2A0A075B6M9 112 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 GTPBP10A4D1E9 387 aaKnown RBP13.91□□□□□ -0.18
ACTN1-219ENST00000556432 RFPL1O75677 317 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 CEACAM5P06731 702 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 ADCY8P40145 1251 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 STAT5AP42229 794 aa13.91□□□□□ -0.18
ACTN1-219ENST00000556432 MTIF2P46199 727 aaKnown RBP13.91□□□□□ -0.18
ACTN1-219ENST00000556432 POLR2LP62875 67 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms