RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PDCD6IPQ8WUM4 868 aaKnown RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 OXNAD1Q96HP4 312 aaPredicted RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 COQ10AQ96MF6 247 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 ALS2CR12Q96Q35 445 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 FCRL5Q96RD9 977 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 LYSMD1Q96S90 227 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 RBM15Q96T37 977 aaKnown RBP eCLIP9.68□□□□□ -0.86
SRP54-210ENST00000556380 MYOCQ99972 504 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 GORASP1Q9BQQ3 440 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 GTPBP2Q9BX10 602 aaKnown RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 ERVMER34-1Q9H9K5 563 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 PCDH9Q9HC56 1237 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 MBNL1Q9NR56 388 aaKnown RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 AASDHPPTQ9NRN7 309 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 PYCARDQ9ULZ3 195 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 FNDC3AQ9Y2H6 1198 aaKnown RBP9.68□□□□□ -0.86
SRP54-210ENST00000556380 COQ6Q9Y2Z9 468 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 TTLL3Q9Y4R7 772 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 PCNX2A6NKB5 2137 aa9.68□□□□□ -0.86
SRP54-210ENST00000556380 A0A0U1RQS6 177 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 LOC285095A0A1B0GVY8 99 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 GOLGA6L9A6NEM1 432 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 C5orf60A6NFR6 353 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 A8MX80 341 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 ANKRD66B4E2M5 251 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 NEBLO76041 1014 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 RECQL5O94762 991 aaPredicted RBP9.67□□□□□ -0.86
SRP54-210ENST00000556380 MT-CYBP00156 380 aaPredicted RBP9.67□□□□□ -0.86
SRP54-210ENST00000556380 EPOP01588 193 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 ALPIP09923 528 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 CTPS1P17812 591 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 NFKB1P19838 968 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 IGFALSP35858 605 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 C21orf59P57076 290 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 PFN3P60673 137 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 PTSQ03393 145 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 CDK18Q07002 472 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 SLC14A1Q13336 389 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 OASLQ15646 514 aaKnown RBP9.67□□□□□ -0.86
SRP54-210ENST00000556380 CNGA3Q16281 694 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 PRAMEF14Q5SWL7 426 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 TPRG1LQ5T0D9 272 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 DARS2Q6PI48 645 aaKnown RBP9.67□□□□□ -0.86
SRP54-210ENST00000556380 LYPD8Q6UX82 237 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 KYAT3Q6YP21 454 aaKnown RBP9.67□□□□□ -0.86
SRP54-210ENST00000556380 Q6ZSR6 202 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 PID1Q7Z2X4 250 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 HSD11B1LQ7Z5J1 315 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 TECPR1Q7Z6L1 1165 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 TSPAN33Q86UF1 283 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 CDKL3Q8IVW4 592 aaPredicted RBP9.67□□□□□ -0.86
SRP54-210ENST00000556380 SLC22A18ASQ8N1D0 253 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 OR13H1Q8NG92 308 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 KLHDC7BQ96G42 594 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 RTKNQ9BST9 563 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 GAREM1Q9H706 876 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 TRMT1Q9NXH9 659 aaKnown RBP9.67□□□□□ -0.86
SRP54-210ENST00000556380 CDV3Q9UKY7 258 aaKnown RBP9.67□□□□□ -0.86
SRP54-210ENST00000556380 DNPEPQ9ULA0 475 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 PCDHGB2Q9Y5G2 931 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 PLXNA2O75051 1894 aa9.67□□□□□ -0.86
SRP54-210ENST00000556380 ARID1BQ8NFD5 2236 aaPredicted RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 A0A1B0GTQ1 180 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 CAPN8A6NHC0 703 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 USP27XA6NNY8 438 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 FPGTO14772 594 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 KCNN4O15554 427 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 LZTS3O60299 673 aaPredicted RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 PCDHGA12O60330 932 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 DFNA5O60443 496 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 MAGEC1O60732 1142 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 OPHN1O60890 802 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 GCATO75600 419 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 CER1O95813 267 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ELFN1P0C7U0 828 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 THEGLP0DJG4 465 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 CYP2A6P11509 494 aaPredicted RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 CA4P22748 312 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 TRIM23P36406 574 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 STC1P52823 247 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ATXN3P54252 364 aaPredicted RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 WNT3AP56704 352 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 CCDC173Q0VFZ6 552 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 FZD2Q14332 565 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 PUM1Q14671 1186 aaKnown RBP eCLIP9.66□□□□□ -0.86
SRP54-210ENST00000556380 LRRC14Q15048 493 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ANKRD20A2Q5SQ80 823 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 SEL1L2Q5TEA6 688 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ANKRD20A1Q5TYW2 823 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ANKRD20A3Q5VUR7 823 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 RFLNAQ6ZTI6 216 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 KANSL1Q7Z3B3 1105 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ADAT2Q7Z6V5 191 aaKnown RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 NLRP8Q86W28 1048 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 DCP2Q8IU60 420 aaKnown RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 PELI3Q8N2H9 469 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 SLC35F6Q8N357 371 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ZNF511Q8NB15 262 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ATG4AQ8WYN0 398 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 336.3 ms