RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ECT2LQ008S8 904 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.13□□□□□ -1.59
PRPF39-209ENST00000556353 CES5AQ6NT32 575 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 UNQ6126/PRO20091Q6UXV3 157 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 NOL8Q76FK4 1167 aaKnown RBP5.13□□□□□ -1.59
PRPF39-209ENST00000556353 TMPRSS12Q86WS5 348 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 CPXM2Q8N436 756 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 NEK9Q8TD19 979 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 SECTM1Q8WVN6 248 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 RAB40AQ8WXH6 277 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 STN1Q9H668 368 aaKnown RBP5.13□□□□□ -1.59
PRPF39-209ENST00000556353 CYSLTR2Q9NS75 346 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 PCDHGB5Q9Y5G0 923 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 TNS1Q9HBL0 1735 aaKnown RBP5.13□□□□□ -1.59
PRPF39-209ENST00000556353 AFF2P51816 1311 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 ATRNO75882 1429 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 YTHDC2Q9H6S0 1430 aaKnown RBP5.13□□□□□ -1.59
PRPF39-209ENST00000556353 BCL9LQ86UU0 1499 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 DLC1Q96QB1 1528 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 ARHGAP10A1A4S6 786 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 PEX12O00623 359 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 HSPA12AO43301 675 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 PMS2P2O95744 297 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 ZNF8P17098 575 aaPredicted RBP5.12□□□□□ -1.59
PRPF39-209ENST00000556353 AMD1P17707 334 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 SRD5A1P18405 259 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 BLKP51451 505 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 RUNX2Q13950 521 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 ANKRD1Q15327 319 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 LMNTD1Q8N9Z9 388 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 SORCS1Q8WY21 1168 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 LMAN2LQ9H0V9 348 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 SMARCAL1Q9NZC9 954 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 PCDHAC2Q9Y5I4 1007 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 SNX9Q9Y5X1 595 aa5.12□□□□□ -1.59
PRPF39-209ENST00000556353 LRPPRCP42704 1394 aaKnown RBP5.12□□□□□ -1.59
PRPF39-209ENST00000556353 KIAA1210Q9ULL0 1709 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 WNK3Q9BYP7 1800 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 C17orf113A0A1B0GUU1 675 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 CPED1A4D0V7 1026 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 WNT9BO14905 357 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 IRAK2O43187 625 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 CEP104O60308 925 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 RGS11O94810 467 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 DGKAP23743 735 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 RYKP34925 604 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 PIGAP37287 484 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 CXCR3P49682 368 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 ARHGEF6Q15052 776 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 C9orf139Q6ZV77 190 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 TUBA1AQ71U36 451 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 ZNF771Q7L3S4 317 aaPredicted RBP5.11□□□□□ -1.59
PRPF39-209ENST00000556353 ZC3HC1Q86WB0 502 aaKnown RBP5.11□□□□□ -1.59
PRPF39-209ENST00000556353 C2CD5Q86YS7 1000 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 USP38Q8NB14 1042 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 CD180Q99467 661 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 TUBA1CQ9BQE3 449 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 CLSTN3Q9BQT9 956 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.11□□□□□ -1.59
PRPF39-209ENST00000556353 EPHX3Q9H6B9 360 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 EVA1AQ9H8M9 152 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 BCCIPQ9P287 314 aaKnown RBP eCLIP5.11□□□□□ -1.59
PRPF39-209ENST00000556353 SLCO3A1Q9UIG8 710 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 RPGRIP1LQ68CZ1 1315 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 SLIT2O94813 1529 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 THSD7AQ9UPZ6 1657 aa5.11□□□□□ -1.59
PRPF39-209ENST00000556353 IGHV4OR15-8A0A075B7B6 117 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 SH2D7A6NKC9 451 aaPredicted RBP5.1□□□□□ -1.59
PRPF39-209ENST00000556353 HNRNPCL2B2RXH8 293 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 ERVV-2B6SEH9 535 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 PER2O15055 1255 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 SP1P08047 785 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 PCNAP12004 261 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 PTPN2P17706 415 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 GRK6P43250 576 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 PAPOLAP51003 745 aaKnown RBP5.1□□□□□ -1.59
PRPF39-209ENST00000556353 YWHAZP63104 245 aaKnown RBP5.1□□□□□ -1.59
PRPF39-209ENST00000556353 TBL3Q12788 808 aaKnown RBP5.1□□□□□ -1.59
PRPF39-209ENST00000556353 TAF5Q15542 800 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 ESCO2Q56NI9 601 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 ANO1Q5XXA6 986 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 ZNF772Q68DY9 489 aaPredicted RBP5.1□□□□□ -1.59
PRPF39-209ENST00000556353 MEX3BQ6ZN04 569 aaKnown RBP5.1□□□□□ -1.59
PRPF39-209ENST00000556353 TBC1D26Q86UD7 250 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 CD101Q93033 1021 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 ABCC11Q96J66 1382 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 FEM1CQ96JP0 617 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 SPRY4Q9C004 299 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 QRICH2Q9H0J4 1663 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 RAB3GAP2Q9H2M9 1393 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 MROH8Q9H579 483 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 SLC32A1Q9H598 525 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 UBTD1Q9HAC8 227 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 SDF2L1Q9HCN8 221 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 ALKBH4Q9NXW9 302 aa5.1□□□□□ -1.59
PRPF39-209ENST00000556353 COL14A1Q05707 1796 aaKnown RBP5.09□□□□□ -1.59
PRPF39-209ENST00000556353 RGPD5Q99666 1765 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 NRKQ7Z2Y5 1582 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 ATP7BP35670 1465 aa5.09□□□□□ -1.59
PRPF39-209ENST00000556353 RALGAPBQ86X10 1494 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms