RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 TNFRSF10CO14798 259 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 HTRA2O43464 458 aaPredicted RBP13.3□□□□□ -0.28
TGFB3-204ENST00000556285 MAFKO60675 156 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 HOXC4P09017 264 aaPredicted RBP13.3□□□□□ -0.28
TGFB3-204ENST00000556285 LHCGRP22888 699 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 ETV5P41161 510 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 MAZP56270 477 aaKnown RBP13.3□□□□□ -0.28
TGFB3-204ENST00000556285 POLR2LP62875 67 aaKnown RBP13.3□□□□□ -0.28
TGFB3-204ENST00000556285 KLHL30Q0D2K2 578 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 TRAF2Q12933 501 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.28
TGFB3-204ENST00000556285 DPYSL2Q16555 572 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 LINC00303Q3SY05 128 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 C14orf28Q4W4Y0 310 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 SPECC1LQ69YQ0 1117 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 PPP1R2P3Q6NXS1 205 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 CCDC81Q6ZN84 652 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 RFLNAQ6ZTI6 216 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 POLNQ7Z5Q5 900 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 SPRED1Q7Z699 444 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 NRROSQ86YC3 692 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 JAMLQ86YT9 394 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 PSTKQ8IV42 348 aaKnown RBP13.3□□□□□ -0.28
TGFB3-204ENST00000556285 HSPH1Q92598 858 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 BTBD6Q96KE9 485 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 CSPG4P5Q96PW8 444 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 DPEP2Q9H4A9 486 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 WDR26Q9H7D7 661 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 LRIT1Q9P2V4 623 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 PISDQ9UG56 409 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 ST14Q9Y5Y6 855 aa13.3□□□□□ -0.28
TGFB3-204ENST00000556285 NPIPB15A6NHN6 443 aaPredicted RBP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 H3BRJ5 948 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 B4GAT1O43505 415 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 HEXIM1O94992 359 aaKnown RBP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 CPP00450 1065 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 CEACAM5P06731 702 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 RARAP10276 462 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 GLB1P16278 677 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 WT1P19544 449 aaPredicted RBP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 CCKBRP32239 447 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 VIPR1P32241 457 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 ETV3P41162 512 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 POLD2P49005 469 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 RENBPP51606 427 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 NFKB2Q00653 900 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 B4GALNT1Q00973 533 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 ZFP36L1Q07352 338 aaKnown RBP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 ZNF235Q14590 738 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 IHHQ14623 411 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 TSPAN33Q86UF1 283 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 HEATR4Q86WZ0 1026 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 CBARPQ8N350 705 aaPredicted RBP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 LZTR1Q8N653 840 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 NUS1Q96E22 293 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 CCDC97Q96F63 343 aaPredicted RBP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 WBP1Q96G27 269 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 ZNF599Q96NL3 588 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 NUDCD1Q96RS6 583 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 TEX101Q9BY14 249 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 STRADBQ9C0K7 418 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 ISCUQ9H1K1 167 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 SEMA6CQ9H3T2 930 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 CARS2Q9HA77 564 aaKnown RBP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 PCDH18Q9HCL0 1135 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.29□□□□□ -0.28
TGFB3-204ENST00000556285 APPL1Q9UKG1 709 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 LOXL2Q9Y4K0 774 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 PCDHGA7Q9Y5G6 932 aa13.29□□□□□ -0.28
TGFB3-204ENST00000556285 PRAMEF33A0A0G2JMD5 474 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 A0A1B0GTH6 734 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.28□□□□□ -0.28
TGFB3-204ENST00000556285 A0A1W2PQC6 194 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 B8ZZF3 427 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 PRAMEF10O60809 474 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 FGF1P05230 155 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 MYCLP1P12525 358 aaPredicted RBP13.28□□□□□ -0.28
TGFB3-204ENST00000556285 CTPS1P17812 591 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 KELP23276 732 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 AK4P27144 223 aaPredicted RBP13.28□□□□□ -0.28
TGFB3-204ENST00000556285 PCK1P35558 622 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 OR1D5P58170 312 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 HGSNATQ68CP4 663 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 TMCO3Q6UWJ1 677 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 Q6ZVL8 140 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 CPNE8Q86YQ8 564 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 SLITRK4Q8IW52 837 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 OR6C4Q8NGE1 309 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 GPBAR1Q8TDU6 330 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 PATE1Q8WXA2 126 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 DTD2Q96FN9 168 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 TMEM74Q96NL1 305 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 CCNL2Q96S94 520 aaPredicted RBP13.28□□□□□ -0.28
TGFB3-204ENST00000556285 MGME1Q9BQP7 344 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 FRMD8Q9BZ67 464 aaPredicted RBP13.28□□□□□ -0.28
TGFB3-204ENST00000556285 RDH14Q9HBH5 336 aa13.28□□□□□ -0.28
TGFB3-204ENST00000556285 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms