RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PIRTP0C851 137 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 MLNP12872 115 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 C6P13671 934 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 LPOP22079 712 aaPredicted RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 HNRNPA2B1P22626 353 aaKnown RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 MAT2AP31153 395 aaKnown RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 HOXD12P35452 270 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 STC1P52823 247 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 DRG2P55039 364 aaKnown RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 CAV1Q03135 178 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 TCF15Q12870 199 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 OVGP1Q12889 678 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 RALGDSQ12967 914 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 SRSF5Q13243 272 aaKnown RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 SEPT6Q14141 434 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 KCNJ11Q14654 390 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 STAT4Q14765 748 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 AGERQ15109 404 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 TEAD4Q15561 434 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 TAF1AQ15573 450 aaPredicted RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 CNGA3Q16281 694 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 ZNF284Q2VY69 593 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 TMEM259Q4ZIN3 620 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 DNAJC21Q5F1R6 531 aaKnown RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 SEL1L3Q68CR1 1132 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 LRRC66Q68CR7 880 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 DENND2CQ68D51 928 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 LAIR1Q6GTX8 287 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 LRRC8BQ6P9F7 803 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 CEP128Q6ZU80 1094 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 NLRP9Q7RTR0 991 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 CYP2U1Q7Z449 544 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 GLT6D1Q7Z4J2 308 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 TMC3Q7Z5M5 1100 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 NRSN1Q8IZ57 195 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 PDIK1LQ8N165 341 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 DEFB119Q8N690 84 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 FRMD1Q8N878 549 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 PPHLN1Q8NEY8 458 aaKnown RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 OR52K1Q8NGK4 314 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 DNASE2BQ8WZ79 361 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 CPT1BQ92523 772 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 SERAC1Q96JX3 654 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 C19orf43Q9BQ61 176 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 TRIM51Q9BSJ1 452 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 TRIM31Q9BZY9 425 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 IL22Q9GZX6 179 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 MIR1-1HGQ9H1L0 117 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 EPC1Q9H2F5 836 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 CASS4Q9NQ75 786 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.64□□□□□ -1.19
TDP1-214ENST00000556063 SAMD15Q9P1V8 674 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 WHRNQ9P202 907 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 GGT7Q9UJ14 662 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 GMEB2Q9UKD1 530 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 PCDHGA5Q9Y5G8 931 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 RIF1Q5UIP0 2472 aaKnown RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 GPR179Q6PRD1 2367 aa7.64□□□□□ -1.19
TDP1-214ENST00000556063 PTPRZ1P23471 2315 aaPredicted RBP7.64□□□□□ -1.19
TDP1-214ENST00000556063 LRRK1Q38SD2 2015 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 A0A1B0GTW7 788 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 MAGEB16A2A368 324 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SDR42E2A6NKP2 422 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 TOR1BO14657 336 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 FPGTO14772 594 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SPINT1O43278 529 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SEC31AO94979 1220 aaKnown RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 PAK4O96013 591 aaPredicted RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 SLC4A1P02730 911 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 IGHV4-34P06331 123 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 TPH1P17752 444 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 LHCGRP22888 699 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 ADRA1DP25100 572 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 HMGCLP35914 325 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 HADHAP40939 763 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 NBL1P41271 181 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 PTGER3P43115 390 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 TERF1P54274 439 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 ARL4CP56559 192 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SESN2P58004 480 aaPredicted RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 PPP2CBP62714 309 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 RACK1P63244 317 aaKnown RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 PPP2CAP67775 309 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SEMG2Q02383 582 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 CREB5Q02930 508 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 PTSQ03393 145 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 LRRC14Q15048 493 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SKIDA1Q1XH10 827 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 PCID2Q5JVF3 399 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 RNASEH2BQ5TBB1 312 aaKnown RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 DUPD1Q68J44 220 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 DENND5AQ6IQ26 1287 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 CASC4Q6P4E1 433 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 Q6ZVL8 140 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 ZNF765Q7L2R6 523 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 ARMCX6Q7L4S7 300 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 LYSMD3Q7Z3D4 306 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 TSPAN33Q86UF1 283 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 NLRP8Q86W28 1048 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SYT12Q8IV01 421 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms