RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	SKIDA1	Q1XH10	827 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	ERCC6L	Q2NKX8	1250 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	CCDC38	Q502W7	563 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	SETMAR	Q53H47	684 aa	Predicted RBP	12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	LIPI	Q6XZB0	460 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	TSPAN33	Q86UF1	283 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	TRIM69	Q86WT6	500 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	HORMAD1	Q86X24	394 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	CCNJL	Q8IV13	435 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	MAML2	Q8IZL2	1156 aa	Predicted RBP	12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	FAM160A2	Q8N612	972 aa	Predicted RBP	12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	EIF1AD	Q8N9N8	165 aa	Known RBP	12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	CADM4	Q8NFZ8	388 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	GAB3	Q8WWW8	586 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	FOXJ1	Q92949	421 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	STAMBPL1	Q96FJ0	436 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	PRRX2	Q99811	253 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	PHACTR1	Q9C0D0	580 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	CDH19	Q9H159	772 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZSCAN32	Q9NX65	697 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	SYBU	Q9NX95	663 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	NFU1	Q9UMS0	254 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	INVS	Q9Y283	1065 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	TCAF1	Q9Y4C2	921 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	PCDHGA2	Q9Y5H1	932 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	ARL5A	Q9Y689	179 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	TTC28	Q96AY4	2481 aa		12.52	□□□□□ -0.41
ABCD4-223	ENST00000555904	RGSL1	A5PLK6	1076 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	IGLON5	A6NGN9	336 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	TP73	O15350	636 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	SPINT1	O43278	529 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	FSBP	O95073	299 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	POLB	P06746	335 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	SP9	P0CG40	484 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	MAT2A	P31153	395 aa	Known RBP	12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	NUDT1	P36639	197 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	CARS	P49589	748 aa	Known RBP	12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	CCR5	P51681	352 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	STC1	P52823	247 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	CRADD	P78560	199 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	DHX9	Q08211	1270 aa	Known RBP	12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	PTPRR	Q15256	657 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	TRADD	Q15628	312 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	ELF2	Q15723	593 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	FNBP1L	Q5T0N5	605 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	SEL1L3	Q68CR1	1132 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	KIAA0895L	Q68EN5	471 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZC3H14	Q6PJT7	736 aa	Known RBP	12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZDHHC24	Q6UX98	284 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	CEP68	Q76N32	757 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	LPCAT2	Q7L5N7	544 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	TMC3	Q7Z5M5	1100 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	RAVER1	Q8IY67	606 aa	Known RBP	12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZBED8	Q8IZ13	594 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	SNX19	Q92543	992 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	PEX13	Q92968	403 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	NUS1	Q96E22	293 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	SMIM14	Q96QK8	99 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	ANKZF1	Q9H8Y5	726 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZDHHC18	Q9NUE0	388 aa		12.51	□□□□□ -0.41
ABCD4-223	ENST00000555904	MROH6	A6NGR9	719 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	DLL1	O00548	723 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	AURKA	O14965	403 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	LDB2	O43679	373 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	RECQL5	O94762	991 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	TTC4	O95801	387 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	PGAM1	P18669	254 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	TNFRSF8	P28908	595 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	ETV3	P41162	512 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	PPP2CB	P62714	309 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	PPP2CA	P67775	309 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	PRAME	P78395	509 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	PTS	Q03393	145 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZNF284	Q2VY69	593 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	TMEM259	Q4ZIN3	620 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	HSD11B1L	Q7Z5J1	315 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	NRSN1	Q8IZ57	195 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	TTC30B	Q8N4P2	665 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	OR4K2	Q8NGD2	314 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	PYROXD1	Q8WU10	500 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	STYX	Q8WUJ0	223 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	DTD2	Q96FN9	168 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	PLEKHG4B	Q96PX9	1271 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	C19orf43	Q9BQ61	176 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	SLC17A9	Q9BYT1	436 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	C6orf106	Q9H6K1	298 aa	Predicted RBP	12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	MRM3	Q9HC36	420 aa	Known RBP	12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	SAYSD1	Q9NPB0	183 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	CHRAC1	Q9NRG0	131 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	APPL1	Q9UKG1	709 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	SOX13	Q9UN79	622 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	CHMP2B	Q9UQN3	213 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	FNDC3A	Q9Y2H6	1198 aa	Known RBP	12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	RPS6KL1	Q9Y6S9	549 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	ATG2B	Q96BY7	2078 aa		12.5	□□□□□ -0.41
ABCD4-223	ENST00000555904	ANKRD36	A6QL64	1941 aa		12.49	□□□□□ -0.41
ABCD4-223	ENST00000555904		A0A0U1RQS6	177 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms