RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PRRG1O14668 218 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 MATN3O15232 486 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ADAM12O43184 909 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 RASA4O43374 803 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 AVILO75366 819 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 BANF1O75531 89 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ANXA9O76027 345 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 SEC24AO95486 1093 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ASMTLO95671 621 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 JCHAINP01591 159 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 IGLV3-27P01718 113 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 HMBSP08397 361 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 INHBAP08476 426 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 MYF5P13349 255 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 CCNB1P14635 433 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 BRAFP15056 766 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 EPCAMP16422 314 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ATF6P18850 670 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 PSMB4P28070 264 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 NPY2RP49146 381 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 SLC11A2P49281 568 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 HARS2P49590 506 aaKnown RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 DBN1Q16643 649 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 MS4A13Q5J8X5 152 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ATAT1Q5SQI0 421 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 PIK3R6Q5UE93 754 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 SNX30Q5VWJ9 437 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 TTC19Q6DKK2 380 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 KLHDC10Q6PID8 442 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 VN1R5Q7Z5H4 357 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 LINC00523Q86TU6 105 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ITIH5Q86UX2 942 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 NPAS3Q8IXF0 933 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 TCEAL8Q8IYN2 117 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 UMODL1-AS1Q8N2C9 162 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 NPWQ8N729 165 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 NETO2Q8NC67 525 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 GSDMBQ8TAX9 411 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 GRIN3AQ8TCU5 1115 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 DYDC1Q8WWB3 177 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 MAML1Q92585 1016 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 STAMBPL1Q96FJ0 436 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 CFAP36Q96G28 342 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 TRMT2BQ96GJ1 504 aaKnown RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 CELF6Q96J87 481 aaKnown RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 SIGLEC10Q96LC7 697 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 MYRFLQ96LU7 910 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 TEKT5Q96M29 485 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 AGAP3Q96P47 875 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 XPO6Q96QU8 1125 aaKnown RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 SMC6Q96SB8 1091 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 EBNA1BP2Q99848 306 aaKnown RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 DDX50Q9BQ39 737 aaKnown RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 VN1R3Q9BXE9 311 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 SEMA4CQ9C0C4 833 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 SLC39A8Q9C0K1 460 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ADAM19Q9H013 955 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 EPN3Q9H201 632 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 GBA3Q9H227 469 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ARRDC1-AS1Q9H2J1 176 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 PRMT8Q9NR22 394 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 ARHGEF3Q9NR81 526 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 HAUS2Q9NVX0 235 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 TMEM248Q9NWD8 314 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 DNAJB12Q9NXW2 375 aaKnown RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 BFARQ9NZS9 450 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 UXTQ9UBK9 157 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 VANGL2Q9ULK5 521 aa6.9□□□□□ -1.3
SLIRP-204ENST00000555890 AAR2Q9Y312 384 aaKnown RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 MTF2Q9Y483 593 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-204ENST00000555890 IGLV3-10A0A075B6K4 115 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 TCRBV9S1A1TA0A576 114 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 TMEM120BA0PK00 339 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 ZNF840PA6NDX5 716 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 ERICH4A6NGS2 130 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 F5H5T6 163 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 ACSL4O60488 711 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 MAFKO60675 156 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 DIAPH2O60879 1101 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SUN1O94901 812 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 AP2A1O95782 977 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 TBX18O95935 607 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 TDGF1P13385 188 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 CHN1P15882 459 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 PGAM1P18669 254 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 MAGEA3P43357 314 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 IFNAR2P48551 515 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 MAPKAPK2P49137 400 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 PAPOLAP51003 745 aaKnown RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 RENBPP51606 427 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SLC18A1P54219 525 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 GEMP55040 296 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 YBEYP58557 167 aaPredicted RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 STARD6P59095 220 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 SIM1P81133 766 aaPredicted RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 PABPC1LQ4VXU2 614 aaKnown RBP6.89□□□□□ -1.31
SLIRP-204ENST00000555890 RABGAP1LQ5R372 815 aa6.89□□□□□ -1.31
SLIRP-204ENST00000555890 AFMIDQ63HM1 303 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms