RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 PSMD11O00231 422 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
PCNX4-209ENST00000555569 MATN3O15232 486 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 RRP8O43159 456 aaKnown RBP13.82□□□□□ -0.2
PCNX4-209ENST00000555569 MFAP3LO75121 409 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 TCEA3O75764 348 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 MAP3K6O95382 1288 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 KRT10P13645 584 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 LHCGRP22888 699 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 KDELR1P24390 212 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 CCNCP24863 283 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 ABCG1P45844 678 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 GABREP78334 506 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 ARHGEF7Q14155 803 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 MESDQ14696 234 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 TBC1D25Q3MII6 688 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 RBM44Q6ZP01 1051 aaKnown RBP13.82□□□□□ -0.2
PCNX4-209ENST00000555569 HSD11B1LQ7Z5J1 315 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 NDUFAF2Q8N183 169 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 CBARPQ8N350 705 aaPredicted RBP13.82□□□□□ -0.2
PCNX4-209ENST00000555569 PQLC3Q8N755 202 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 PIH1D2Q8WWB5 315 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 FGF11Q92914 225 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 FATE1Q969F0 183 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 GRAMD1AQ96CP6 724 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 DTD2Q96FN9 168 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 TSGA13Q96PP4 275 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 MCCC1Q96RQ3 725 aaPredicted RBP13.82□□□□□ -0.2
PCNX4-209ENST00000555569 CCDC3Q9BQI4 270 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 LGR4Q9BXB1 951 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 MRPL40Q9NQ50 206 aaKnown RBP13.82□□□□□ -0.2
PCNX4-209ENST00000555569 PHPT1Q9NRX4 125 aaPredicted RBP13.82□□□□□ -0.2
PCNX4-209ENST00000555569 HAUS2Q9NVX0 235 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 RBM22Q9NW64 420 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCNX4-209ENST00000555569 AMACRQ9UHK6 382 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 PPIL1Q9Y3C6 166 aa13.82□□□□□ -0.2
PCNX4-209ENST00000555569 NBEAQ8NFP9 2946 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 PRSS38A1L453 326 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 FZD6O60353 706 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 MPOP05164 745 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 PDHA1P08559 390 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 CTPS1P17812 591 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 MX2P20592 715 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 CES1P23141 567 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 ETV3P41162 512 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 LSSP48449 732 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 GBE1Q04446 702 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 PTPRRQ15256 657 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 ALG1LQ6GMV1 187 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 TAF8Q7Z7C8 310 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 TSPAN33Q86UF1 283 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 HEATR4Q86WZ0 1026 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 LSMEM2Q8N112 164 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 SLC35G2Q8TBE7 412 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 RAPGEF5Q92565 580 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 CCDC42Q96M95 316 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 ZNF578Q96N58 590 aaPredicted RBP13.81□□□□□ -0.2
PCNX4-209ENST00000555569 TMEM168Q9H0V1 697 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 NHEJ1Q9H9Q4 299 aaPredicted RBP13.81□□□□□ -0.2
PCNX4-209ENST00000555569 POLR1BQ9H9Y6 1135 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 CYP4F12Q9HCS2 524 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 SPTLC3Q9NUV7 552 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 TTLL3Q9Y4R7 772 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 ENTPD2Q9Y5L3 495 aa13.81□□□□□ -0.2
PCNX4-209ENST00000555569 LRRD1A4D1F6 860 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 GOLGA6CA6NDK9 693 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 GOLGA6BA6NDN3 693 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 DXOO77932 396 aaKnown RBP13.8□□□□□ -0.2
PCNX4-209ENST00000555569 GOLGA6DP0CG33 693 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 MYCLP1P12525 358 aaPredicted RBP13.8□□□□□ -0.2
PCNX4-209ENST00000555569 CCNB1P14635 433 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 ITPKBP27987 946 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 TEAD1P28347 426 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 ARHGAP25P42331 645 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 EPHB1P54762 984 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 DSC2Q02487 901 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 SLC10A2Q12908 348 aaPredicted RBP13.8□□□□□ -0.2
PCNX4-209ENST00000555569 SPIDRQ14159 915 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 RAET1GQ6H3X3 334 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 Q6ZVL8 140 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 RHOT2Q8IXI1 618 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCNX4-209ENST00000555569 CCNYQ8ND76 341 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 FAM46DQ8NEK8 389 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 GPR156Q8NFN8 814 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 OR6C4Q8NGE1 309 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 LRRN4Q8WUT4 740 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 CCDC74AQ96AQ1 378 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 HDAC11Q96DB2 347 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 ATXN7L3BQ96GX2 97 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
PCNX4-209ENST00000555569 RNF157Q96PX1 679 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 TEX101Q9BY14 249 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 GOLGA6AQ9NYA3 693 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 DTLQ9NZJ0 730 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 RABGEF1Q9UJ41 708 aa13.8□□□□□ -0.2
PCNX4-209ENST00000555569 IGSF10Q6WRI0 2623 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms