RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PAMP19021 973 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 COL9A1P20849 921 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 HMGCLP35914 325 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 ABCG1P45844 678 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 PRAMEP78395 509 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 SATB1Q01826 763 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 PPARDQ03181 441 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 PTSQ03393 145 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 CTBP1Q13363 440 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 CAMK2GQ13555 558 aaPredicted RBP10.21□□□□□ -0.77
SRP54-208ENST00000555557 TMED2Q15363 201 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 PDPK2PQ6A1A2 396 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 KIAA0930Q6ICG6 404 aaPredicted RBP10.21□□□□□ -0.77
SRP54-208ENST00000555557 SDE2Q6IQ49 451 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 Q6ZS52 159 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 RFLNAQ6ZTI6 216 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 NLRP9Q7RTR0 991 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 LDB1Q86U70 411 aaPredicted RBP10.21□□□□□ -0.77
SRP54-208ENST00000555557 DENND6AQ8IWF6 608 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 SLC44A1Q8WWI5 657 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 CDKL2Q92772 493 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 CDKN2AIPNLQ96HQ2 116 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 MCCC1Q96RQ3 725 aaPredicted RBP10.21□□□□□ -0.77
SRP54-208ENST00000555557 GABRG3Q99928 467 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 DHRS4Q9BTZ2 278 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 MKRN2Q9H000 416 aaKnown RBP10.21□□□□□ -0.77
SRP54-208ENST00000555557 NLE1Q9NVX2 485 aaPredicted RBP10.21□□□□□ -0.77
SRP54-208ENST00000555557 HACD3Q9P035 362 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 IL17CQ9P0M4 197 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 FKBPLQ9UIM3 349 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 A0A1W2PQ67 120 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 TSPAN11A1L157 253 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 CCDC162PA2VCL2 907 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 C19orf67A6NJJ6 358 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 NPC1O15118 1278 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 MID1O15344 667 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 RGS16O15492 202 aaPredicted RBP10.21□□□□□ -0.78
SRP54-208ENST00000555557 CDH16O75309 829 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 RPP40O75818 363 aaKnown RBP10.21□□□□□ -0.78
SRP54-208ENST00000555557 GOT2P00505 430 aaKnown RBP10.21□□□□□ -0.78
SRP54-208ENST00000555557 INHBAP08476 426 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 HOXB2P14652 356 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 XPAP23025 273 aaPredicted RBP10.21□□□□□ -0.78
SRP54-208ENST00000555557 ITGB7P26010 798 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 COPAP53621 1224 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 ACVR1Q04771 509 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 LAMB3Q13751 1172 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 THOC5Q13769 683 aaKnown RBP10.21□□□□□ -0.78
SRP54-208ENST00000555557 HSP90B2PQ58FF3 399 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 NEPROQ6NW34 567 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 FBXL19Q6PCT2 694 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 ADGRD1Q6QNK2 874 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 ZNF852Q6ZMS4 543 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 SLC26A11Q86WA9 606 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 NDUFAF2Q8N183 169 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 SPOCK2Q92563 424 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 LYSMD1Q96S90 227 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 RSPH9Q9H1X1 276 aaPredicted RBP10.21□□□□□ -0.78
SRP54-208ENST00000555557 TRABDQ9H4I3 376 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 ARHGEF3Q9NR81 526 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 EURLQ9NYK6 297 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 MARCH4Q9P2E8 410 aaPredicted RBP10.21□□□□□ -0.78
SRP54-208ENST00000555557 DKK3Q9UBP4 350 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 SLC24A2Q9UI40 661 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 FBXL21Q9UKT6 434 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 NOVA2Q9UNW9 492 aaKnown RBP10.21□□□□□ -0.78
SRP54-208ENST00000555557 IKBKGQ9Y6K9 419 aa10.21□□□□□ -0.78
SRP54-208ENST00000555557 MUC3AQ02505 3323 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 C1QTNF3-AMACRE9PGA6 284 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 MAN2B1O00754 1011 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 GPR39O43194 453 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 TARSP26639 723 aaKnown RBP10.2□□□□□ -0.78
SRP54-208ENST00000555557 CDKN1CP49918 316 aaPredicted RBP10.2□□□□□ -0.78
SRP54-208ENST00000555557 MRPS21P82921 87 aaKnown RBP10.2□□□□□ -0.78
SRP54-208ENST00000555557 MPP1Q00013 466 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 GPS2Q13227 327 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 BMPR2Q13873 1038 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 FRG1Q14331 258 aaKnown RBP10.2□□□□□ -0.78
SRP54-208ENST00000555557 CST6Q15828 149 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 ZNF470Q6ECI4 717 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 TMEM92Q6UXU6 159 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 STRA8Q7Z7C7 330 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 DSG4Q86SJ6 1040 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 OTUD6BQ8N6M0 293 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 KCNV2Q8TDN2 545 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 HCAR2Q8TDS4 363 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 ATXN7L3BQ96GX2 97 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 MSANTD3Q96H12 275 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 FAM96AQ9H5X1 160 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 CD320Q9NPF0 282 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 DYRK4Q9NR20 520 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 PSMC3IPQ9P2W1 217 aaPredicted RBP10.2□□□□□ -0.78
SRP54-208ENST00000555557 SERGEFQ9UGK8 458 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 PKP3Q9Y446 797 aa10.2□□□□□ -0.78
SRP54-208ENST00000555557 SLC7A4O43246 635 aa10.19□□□□□ -0.78
SRP54-208ENST00000555557 SPINT1O43278 529 aa10.19□□□□□ -0.78
SRP54-208ENST00000555557 C1SP09871 688 aa10.19□□□□□ -0.78
SRP54-208ENST00000555557 CHRNB1P11230 501 aa10.19□□□□□ -0.78
SRP54-208ENST00000555557 ADRB3P13945 408 aa10.19□□□□□ -0.78
SRP54-208ENST00000555557 BPIP17213 487 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms