RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 LRRC69Q6ZNQ3 347 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 HSD11B1LQ7Z5J1 315 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 TAF8Q7Z7C8 310 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 KYQ8NBH2 561 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 LRRN4Q8WUT4 740 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 RAPGEF5Q92565 580 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 MAML1Q92585 1016 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 FAF2Q96CS3 445 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 SCRN2Q96FV2 425 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 RBM15Q96T37 977 aaKnown RBP eCLIP24.47■■□□□ 1.51
PRKCH-216ENST00000555542 CCDC3Q9BQI4 270 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 MAK16Q9BXY0 300 aaKnown RBP24.47■■□□□ 1.51
PRKCH-216ENST00000555542 SUDS3Q9H7L9 328 aaPredicted RBP24.47■■□□□ 1.51
PRKCH-216ENST00000555542 CYP4F12Q9HCS2 524 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 PHPT1Q9NRX4 125 aaPredicted RBP24.47■■□□□ 1.51
PRKCH-216ENST00000555542 APC2O95996 2303 aa24.47■■□□□ 1.51
PRKCH-216ENST00000555542 ZZEF1O43149 2961 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 PSMD11O00231 422 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 RRP8O43159 456 aaKnown RBP24.46■■□□□ 1.51
PRKCH-216ENST00000555542 MPOP05164 745 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 HOXC4P09017 264 aaPredicted RBP24.46■■□□□ 1.51
PRKCH-216ENST00000555542 MYCLP1P12525 358 aaPredicted RBP24.46■■□□□ 1.51
PRKCH-216ENST00000555542 LHCGRP22888 699 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 CES1P23141 567 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 TRIM23P36406 574 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 ARHGAP25P42331 645 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 GABREP78334 506 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 RAET1GQ6H3X3 334 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 RBM44Q6ZP01 1051 aaKnown RBP24.46■■□□□ 1.51
PRKCH-216ENST00000555542 TSPAN33Q86UF1 283 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 HEATR4Q86WZ0 1026 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 CCDC13Q8IYE1 715 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 PQLC3Q8N755 202 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 DTD2Q96FN9 168 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 TSGA13Q96PP4 275 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 LGR4Q9BXB1 951 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 AMACRQ9UHK6 382 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 HEY1Q9Y5J3 304 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 PKD1L2Q7Z442 2459 aa24.46■■□□□ 1.51
PRKCH-216ENST00000555542 A0A087WV48 116 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 TNFRSF10CO14798 259 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 TLX3O43711 291 aaPredicted RBP24.45■■□□□ 1.5
PRKCH-216ENST00000555542 PDHA1P08559 390 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 TNNT1P13805 278 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 ABCG1P45844 678 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 PTPRRQ15256 657 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 ISXQ2M1V0 245 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 KCTD16Q68DU8 428 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 PELI3Q8N2H9 469 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 WDR48Q8TAF3 677 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 PIH1D2Q8WWB5 315 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 HDAC11Q96DB2 347 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 RNF157Q96PX1 679 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 MCCC1Q96RQ3 725 aaPredicted RBP24.45■■□□□ 1.5
PRKCH-216ENST00000555542 TRIM5Q9C035 493 aa24.45■■□□□ 1.5
PRKCH-216ENST00000555542 URB1O60287 2271 aaKnown RBP24.45■■□□□ 1.5
PRKCH-216ENST00000555542 PRSS38A1L453 326 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 KRT1P04264 644 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 HLA-DQB2P05538 268 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 SPIDRQ14159 915 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 LRRC66Q68CR7 880 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 Q6ZVL8 140 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 FAM46DQ8NEK8 389 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 FGF11Q92914 225 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 FATE1Q969F0 183 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 CCDC74AQ96AQ1 378 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 TMEM168Q9H0V1 697 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 CARS2Q9HA77 564 aaKnown RBP24.44■■□□□ 1.5
PRKCH-216ENST00000555542 DTLQ9NZJ0 730 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 CHKBQ9Y259 395 aa24.44■■□□□ 1.5
PRKCH-216ENST00000555542 ANKRD11Q6UB99 2663 aaPredicted RBP24.43■■□□□ 1.5
PRKCH-216ENST00000555542 APOL1O14791 398 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 TCEA3O75764 348 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 EIF2S3P41091 472 aaKnown RBP24.43■■□□□ 1.5
PRKCH-216ENST00000555542 SLC10A2Q12908 348 aaPredicted RBP24.43■■□□□ 1.5
PRKCH-216ENST00000555542 TBC1D25Q3MII6 688 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 C3orf38Q5JPI3 329 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 PDZD3Q86UT5 571 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 LSMEM2Q8N112 164 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 TDRD1Q9BXT4 1180 aaKnown RBP24.43■■□□□ 1.5
PRKCH-216ENST00000555542 DPEP2Q9H4A9 486 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 POLR1BQ9H9Y6 1135 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 CD84Q9UIB8 345 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 PPIL1Q9Y3C6 166 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 ASXL3Q9C0F0 2248 aa24.43■■□□□ 1.5
PRKCH-216ENST00000555542 A0A0U1RQS6 177 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 B4DGG1 531 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 SPOPO43791 374 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 FZD6O60353 706 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 MTA2O94776 668 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 GPR1P46091 355 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 CDK3Q00526 305 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 AP1B1Q10567 949 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 ALG1LQ6GMV1 187 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 RFX6Q8HWS3 928 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 LPCAT1Q8NF37 534 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 OR6C4Q8NGE1 309 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 SNIP1Q8TAD8 396 aaKnown RBP24.42■■□□□ 1.5
PRKCH-216ENST00000555542 ATXN7L3BQ96GX2 97 aa24.42■■□□□ 1.5
PRKCH-216ENST00000555542 LGMNQ99538 433 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms