RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 PLXNA4Q9HCM2 1894 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 MZF1P28698 734 aaPredicted RBP24.3■■□□□ 1.48
TMEM260-207ENST00000555497 STC1P52823 247 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 DEFB103AP81534 67 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 CCDC6Q16204 474 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 NXNQ6DKJ4 435 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 MYLK4Q86YV6 388 aaPredicted RBP24.3■■□□□ 1.48
TMEM260-207ENST00000555497 DEFB107AQ8IZN7 70 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 CPSF7Q8N684 471 aaKnown RBP24.3■■□□□ 1.48
TMEM260-207ENST00000555497 ACTRT2Q8TDY3 377 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 ADAMTS19Q8TE59 1207 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 TOX2Q96NM4 488 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 CCDC28BQ9BUN5 200 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 POLR3BQ9NW08 1133 aaPredicted RBP24.3■■□□□ 1.48
TMEM260-207ENST00000555497 SDHDO14521 159 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 PRRG1O14668 218 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 PDE5AO76074 875 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 C1RP00736 705 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 MBL2P11226 248 aaPredicted RBP24.29■■□□□ 1.48
TMEM260-207ENST00000555497 ARSAP15289 507 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 ELF1P32519 619 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 GCKP35557 465 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 SLC26A3P40879 764 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 BTKQ06187 659 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 SLC34A1Q06495 639 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 RAB33AQ14088 237 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 TYSND1Q2T9J0 566 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 CFAP61Q8NHU2 1237 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 STON2Q8WXE9 905 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 STOML1Q9UBI4 398 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 FIS1Q9Y3D6 152 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 CD1DP15813 335 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 OGNP20774 298 aaKnown RBP24.29■■□□□ 1.48
TMEM260-207ENST00000555497 EPHB1P54762 984 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 TAF11Q15544 211 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 EML3Q32P44 896 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 GLT6D1Q7Z4J2 308 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 LPCAT1Q8NF37 534 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 DIS3LQ8TF46 1054 aaKnown RBP24.29■■□□□ 1.48
TMEM260-207ENST00000555497 CCDC126Q96EE4 140 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 MAELQ96JY0 434 aaKnown RBP24.29■■□□□ 1.48
TMEM260-207ENST00000555497 RTKNQ9BST9 563 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 HERC2P3Q9BVR0 1158 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 GSTO2Q9H4Y5 243 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 TRPC7Q9HCX4 862 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 RAI2Q9Y5P3 530 aa24.29■■□□□ 1.48
TMEM260-207ENST00000555497 A0A0U1RQS6 177 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 GREM1O60565 184 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 CCNT2O60583 730 aaKnown RBP24.28■■□□□ 1.48
TMEM260-207ENST00000555497 TBL1XO60907 577 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 TMCC1O94876 653 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 CRTAMO95727 393 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 CDKN1CP49918 316 aaPredicted RBP24.28■■□□□ 1.48
TMEM260-207ENST00000555497 SUOXP51687 545 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 SMAD3P84022 425 aaKnown RBP24.28■■□□□ 1.48
TMEM260-207ENST00000555497 VEPH1Q14D04 833 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 SNX32Q86XE0 403 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 AARSD1Q9BTE6 412 aaKnown RBP24.28■■□□□ 1.48
TMEM260-207ENST00000555497 RC3H2Q9HBD1 1191 aaKnown RBP24.28■■□□□ 1.48
TMEM260-207ENST00000555497 STOML2Q9UJZ1 356 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 ARHGAP26Q9UNA1 814 aa24.28■■□□□ 1.48
TMEM260-207ENST00000555497 UBFD1O14562 309 aaKnown RBP24.27■■□□□ 1.48
TMEM260-207ENST00000555497 SPATA31D3P0C874 917 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 TAF1AQ15573 450 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-207ENST00000555497 SETMARQ53H47 684 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-207ENST00000555497 SPATA31D4Q6ZUB0 917 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 CARNMT1Q8N4J0 409 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 CDH22Q9UJ99 828 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 ATP11BQ9Y2G3 1177 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 MED16Q9Y2X0 877 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 H3BMM5 538 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 SKAP2O75563 359 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-207ENST00000555497 PMLP29590 882 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 PPARGP37231 505 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-207ENST00000555497 TRAF2Q12933 501 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 SDCCAG8Q86SQ7 713 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-207ENST00000555497 CUZD1Q86UP6 607 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 ARL14EPQ8N8R7 260 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-207ENST00000555497 WFDC5Q8TCV5 224 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 SAGE1Q9NXZ1 904 aa24.27■■□□□ 1.48
TMEM260-207ENST00000555497 ARIH1Q9Y4X5 557 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-207ENST00000555497 OBSL1O75147 1896 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 RGSL1A5PLK6 1076 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 ZNF37AP17032 561 aaPredicted RBP24.26■■□□□ 1.47
TMEM260-207ENST00000555497 TSPAN8P19075 237 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 IMPDH1P20839 514 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 CDC25CP30307 473 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 OR4D1Q15615 310 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 C6orf163Q5TEZ5 329 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 TXNDC8Q6A555 127 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 SLC22A9Q8IVM8 553 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 RYBPQ8N488 228 aaPredicted RBP24.26■■□□□ 1.47
TMEM260-207ENST00000555497 RSRC1Q96IZ7 334 aaKnown RBP24.26■■□□□ 1.47
TMEM260-207ENST00000555497 NMRK1Q9NWW6 199 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 LHX3Q9UBR4 397 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 CORO1CQ9ULV4 474 aaPredicted RBP24.26■■□□□ 1.47
TMEM260-207ENST00000555497 INSL5Q9Y5Q6 135 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 LAMA2P24043 3122 aaKnown RBP24.26■■□□□ 1.47
TMEM260-207ENST00000555497 THRAP10827 490 aa24.26■■□□□ 1.47
TMEM260-207ENST00000555497 PSMA3P25788 255 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms