RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 A0A1W2PQ67 120 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 TMEM202A6NGA9 273 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 CAPN8A6NHC0 703 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 F5H423 210 aaPredicted RBP13.68□□□□□ -0.22
SNX6-203ENST00000555416 DDX3YO15523 660 aaKnown RBP13.68□□□□□ -0.22
SNX6-203ENST00000555416 MT-CYBP00156 380 aaPredicted RBP13.68□□□□□ -0.22
SNX6-203ENST00000555416 C1SP09871 688 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 CES1P23141 567 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 TRIM23P36406 574 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 NR2C2P49116 596 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 ACADVLP49748 655 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 HNRNPKP61978 463 aaKnown RBP eCLIP13.68□□□□□ -0.224e-8■□□□□ 11.2
SNX6-203ENST00000555416 PTSQ03393 145 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 ZNF211Q13398 564 aaPredicted RBP13.68□□□□□ -0.22
SNX6-203ENST00000555416 NFATC4Q14934 902 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 DEFB133Q30KQ1 61 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 TEX44Q53QW1 395 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 LRRC66Q68CR7 880 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 PNCKQ6P2M8 343 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 ENPP7Q6UWV6 458 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 DHRS13Q6UX07 377 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 USP45Q70EL2 814 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 LMX1AQ8TE12 382 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
SNX6-203ENST00000555416 TFB1MQ8WVM0 346 aaKnown RBP13.68□□□□□ -0.22
SNX6-203ENST00000555416 OR1E3Q8WZA6 343 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 P3H4Q92791 437 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 NUS1Q96E22 293 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 DTD2Q96FN9 168 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 PDXPQ96GD0 296 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 QKIQ96PU8 341 aaKnown RBP eCLIP13.68□□□□□ -0.222e-11■■■■■ 27.9
SNX6-203ENST00000555416 ANP32EQ9BTT0 268 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 LRRC61Q9BV99 259 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 GLOD4Q9HC38 313 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 FGF22Q9HCT0 170 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 CD84Q9UIB8 345 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNX6-203ENST00000555416 PLXNB3Q9ULL4 1909 aa13.68□□□□□ -0.22
SNX6-203ENST00000555416 C1QTNF9BB2RNN3 333 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 AQP9O43315 295 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 CLDN7O95471 211 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 SOD1P00441 154 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 FUCA1P04066 466 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 PIRTP0C851 137 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 C1QTNF9P0C862 333 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 CYP2A6P11509 494 aaPredicted RBP13.67□□□□□ -0.22
SNX6-203ENST00000555416 STC1P52823 247 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 EPHB1P54762 984 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 KIF5AQ12840 1032 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 PTK2BQ14289 1009 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 GALNT3Q14435 633 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 ESRP1Q6NXG1 681 aaKnown RBP13.67□□□□□ -0.22
SNX6-203ENST00000555416 HID1Q8IV36 788 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 GATA6Q92908 595 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 SCAMP4Q969E2 229 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 EID2BQ96D98 161 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 CALR3Q96L12 384 aaKnown RBP13.67□□□□□ -0.22
SNX6-203ENST00000555416 TEKT5Q96M29 485 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 WDR24Q96S15 920 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 AGAP2Q99490 1192 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 OSBPL8Q9BZF1 889 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 SLC25A51Q9H1U9 297 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 ABCG8Q9H221 673 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 MRPL40Q9NQ50 206 aaKnown RBP13.67□□□□□ -0.22
SNX6-203ENST00000555416 UBP1Q9NZI7 540 aa13.67□□□□□ -0.22
SNX6-203ENST00000555416 APOBEC3BQ9UH17 382 aaKnown RBP13.67□□□□□ -0.22
SNX6-203ENST00000555416 MAP1BP46821 2468 aaKnown RBP13.67□□□□□ -0.22
SNX6-203ENST00000555416 GOLGA4Q13439 2230 aaKnown RBP13.66□□□□□ -0.22
SNX6-203ENST00000555416 CCDC66A2RUB6 948 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 FAM149AA5PLN7 773 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 TOR1BO14657 336 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 CASC3O15234 703 aaKnown RBP13.66□□□□□ -0.22
SNX6-203ENST00000555416 TRIM16O95361 564 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 TSHRP16473 764 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 NFKB1P19838 968 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 PTPN7P35236 360 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 HK3P52790 923 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 RWDD2BP57060 319 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 GSDMDP57764 484 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 KIAA1024LP59773 190 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 SRP54P61011 504 aaKnown RBP13.66□□□□□ -0.22
SNX6-203ENST00000555416 COPS2P61201 443 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 OTUD4Q01804 1114 aaKnown RBP13.66□□□□□ -0.22
SNX6-203ENST00000555416 PPARDQ03181 441 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 NOMO1Q15155 1222 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 PCSK7Q16549 785 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 PRRT3Q5FWE3 981 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 FAXCQ5TGI0 409 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 RD3Q7Z3Z2 195 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 PEX26Q7Z412 305 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 HEATR4Q86WZ0 1026 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 ZNF567Q8N184 647 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 ACTL9Q8TC94 416 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 OXNAD1Q96HP4 312 aaPredicted RBP13.66□□□□□ -0.22
SNX6-203ENST00000555416 APOLD1Q96LR9 279 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 WDR92Q96MX6 357 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 GORASP1Q9BQQ3 440 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 NLGN3Q9NZ94 848 aa13.66□□□□□ -0.22
SNX6-203ENST00000555416 AMFRQ9UKV5 643 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms