RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 SLC25A13Q9UJS0 675 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 ARHGAP26Q9UNA1 814 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 CABIN1Q9Y6J0 2220 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 PRPF4O43172 522 aaKnown RBP eCLIP12.24□□□□□ -0.459e-7■■■□□ 14.9
ARHGEF40-206ENST00000555232 STAU1O95793 577 aaKnown RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 ADH1AP07327 375 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 NELFEP18615 380 aaKnown RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 RGS4P49798 205 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 LIMK2P53671 638 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 ABRQ12979 859 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 CYLC2Q14093 348 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 DNAJB14Q8TBM8 379 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 PYCR2Q96C36 320 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 RCN3Q96D15 328 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 LINGO1Q96FE5 620 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TBCDQ9BTW9 1192 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 HGH1Q9BTY7 390 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 PHACTR1Q9C0D0 580 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 ARHGEF3Q9NR81 526 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TLR6Q9Y2C9 796 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 HBS1LQ9Y450 684 aaKnown RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 ACTL7BQ9Y614 415 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TRAV19A0A0A6YYK7 116 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 HNRNPRO43390 633 aaKnown RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TM4SF4P48230 202 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 RPL14P50914 215 aaKnown RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 HNRNPDQ14103 355 aaKnown RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 SMYD5Q6GMV2 418 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 KRT80Q6KB66 452 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TRMT11Q7Z4G4 463 aaKnown RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 HPS6Q86YV9 775 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TRAPPC5Q8IUR0 188 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 SIDT2Q8NBJ9 832 aaKnown RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 RTP3Q9BQQ7 232 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TMEM109Q9BVC6 243 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TRIM54Q9BYV2 358 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 SLC25A51Q9H1U9 297 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 VCX3AQ9NNX9 186 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 NSMCE4AQ9NXX6 385 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 RCOR3Q9P2K3 495 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 EGFL7Q9UHF1 273 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 SNX13Q9Y5W8 968 aa12.24□□□□□ -0.45
ARHGEF40-206ENST00000555232 TRBV23OR9-2A0A075B6M9 112 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 GRXCR1A8MXD5 290 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 I6L893 689 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 TEX28O15482 410 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 E2F6O75461 281 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 RFPL1O75677 317 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 TMCC1O94876 653 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 CLTBP09497 229 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 LTA4HP09960 611 aaKnown RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 TPBGLP0DKB5 382 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 SLC2A4P14672 509 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 CNTFP26441 200 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 CCNFP41002 786 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 RALGDSQ12967 914 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 TCEAL1Q15170 157 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 GK5Q6ZS86 529 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 IGSF21Q96ID5 467 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 ATG10Q9H0Y0 220 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 UPF3AQ9H1J1 476 aaKnown RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 PKD2L2Q9NZM6 624 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 MARCH4Q9P2E8 410 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 KLQ9UEF7 1012 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 TDRKHQ9Y2W6 561 aaKnown RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 QSER1Q2KHR3 1735 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 OR1I1O60431 355 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 LRATO95237 230 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 HNRNPCP07910 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 ABCB1P08183 1280 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 CDKN1CP49918 316 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 PLA2G4EQ3MJ16 856 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 FNDC3BQ53EP0 1204 aaKnown RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 TEDDM1Q5T9Z0 273 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 POTEHQ6S545 545 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 RINLQ6ZS11 566 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 Q6ZVU0 165 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 GRASPQ7Z6J2 395 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 ZNF461Q8TAF7 563 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 SH3RF2Q8TEC5 729 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 NTAN1Q96AB6 310 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 MTIF3Q9H2K0 278 aaKnown RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 SMOC2Q9H3U7 446 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 CAPN10Q9HC96 672 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 TRIM24O15164 1050 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 FGF18O76093 207 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 MPOP05164 745 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 ARSAP15289 507 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 KPNA1P52294 538 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 CAP1Q01518 475 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 NIPAL4Q0D2K0 466 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 PABPC1LQ4VXU2 614 aaKnown RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 PAQR3Q6TCH7 311 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 IL27RAQ6UWB1 636 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 C11orf74Q86VG3 221 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 EME1Q96AY2 570 aa12.23□□□□□ -0.45
ARHGEF40-206ENST00000555232 PLEKHG4BQ96PX9 1271 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms