RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CLEC18CQ8NCF0 446 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 RFWD2Q8NHY2 731 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 GDAP1Q8TB36 358 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 BICD2Q8TD16 824 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 IP6K1Q92551 441 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 SLC22A18Q96BI1 424 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 SAAL1Q96ER3 474 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 LMLNQ96KR4 655 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 WDR77Q9BQA1 342 aaPredicted RBP5.44□□□□□ -1.54
VRK1-203ENST00000555067 KLHL4Q9C0H6 718 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 KAT14Q9H8E8 782 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 ALKBH4Q9NXW9 302 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 EHD2Q9NZN4 543 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 SUCLA2Q9P2R7 463 aaPredicted RBP5.44□□□□□ -1.54
VRK1-203ENST00000555067 RAB21Q9UL25 225 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 TRPC5Q9UL62 973 aaPredicted RBP5.44□□□□□ -1.54
VRK1-203ENST00000555067 SLC12A4Q9UP95 1085 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 CCL27Q9Y4X3 112 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 SLC4A4Q9Y6R1 1079 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 A0A1W2PQM1 296 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 IFITM10A6NMD0 228 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 TAF4O00268 1085 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 OR2C1O95371 312 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 LCATP04180 440 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 SELLP14151 372 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 TLX1P31314 330 aaPredicted RBP5.43□□□□□ -1.54
VRK1-203ENST00000555067 SELENOVP59797 346 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 ZP1P60852 638 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 RBM6P78332 1123 aaKnown RBP5.43□□□□□ -1.54
VRK1-203ENST00000555067 CRYMQ14894 314 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 E2F5Q15329 346 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 ERMARDQ5T6L9 678 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 DCAF12L2Q5VW00 463 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 ADALQ6DHV7 355 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 ALKBH5Q6P6C2 394 aaKnown RBP5.43□□□□□ -1.54
VRK1-203ENST00000555067 AAGABQ6PD74 315 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 FAM83HQ6ZRV2 1179 aaPredicted RBP5.43□□□□□ -1.54
VRK1-203ENST00000555067 CHST9Q7L1S5 443 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 PLPPR4Q7Z2D5 763 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 GLRX5Q86SX6 157 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 BRSK2Q8IWQ3 736 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 UNC45BQ8IWX7 931 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 ARL6IP6Q8N6S5 226 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 KDM1BQ8NB78 822 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 ENGASEQ8NFI3 743 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 ARRDC3Q96B67 414 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 ZNF653Q96CK0 615 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 RNFT2Q96EX2 444 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 GCNAQ96QF7 691 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 CD180Q99467 661 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 SLC35C2Q9NQQ7 365 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 HCN3Q9P1Z3 774 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 SUFUQ9UMX1 484 aa5.43□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3DA0A087WVF3 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3IA0A087WXS9 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3EA0A087X179 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3KA0A087X1G2 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 GOLGA6L10A0A0M3HER8 536 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 A0A1B0GVT2 93 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3BA6NDS4 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3FA6NER0 549 aaPredicted RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3LB9A6J9 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TEX22C9J3V5 150 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 BCAT2O15382 392 aaPredicted RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 FMO6PO60774 539 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 HNRNPCL1O60812 293 aaKnown RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 SEC14L2O76054 403 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 GAS8-AS1O95177 125 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3HP0C7X1 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 THEGLP0DJG4 465 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TNNT1P13805 278 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 ART1P52961 327 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 THOC5Q13769 683 aaKnown RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 TTC31Q49AM3 519 aaPredicted RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 ODF2Q5BJF6 829 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 ARL13AQ5H913 290 aaPredicted RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3GQ6DHY5 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3CQ6IPX1 549 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 IYDQ6PHW0 289 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 KIAA1324Q6UXG2 1013 aaKnown RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 CATSPER4Q7RTX7 472 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 GALNT7Q86SF2 657 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 ADGRA1Q86SQ6 560 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 MON1AQ86VX9 555 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 NR2C2APQ86WQ0 139 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 ERC1Q8IUD2 1116 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 FAM217AQ8IXS0 508 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TBC1D3Q8IZP1 549 aaPredicted RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 DPP10Q8N608 796 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 TMCO5AQ8N6Q1 288 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 POC5Q8NA72 575 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 POMGNT2Q8NAT1 580 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 POGLUT1Q8NBL1 392 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 MOSPD2Q8NHP6 518 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 ARHGEF2Q92974 986 aaKnown RBP5.42□□□□□ -1.54
VRK1-203ENST00000555067 WDFY2Q96P53 400 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 CLSTN3Q9BQT9 956 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 CDT1Q9H211 546 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 LTB4R2Q9NPC1 389 aa5.42□□□□□ -1.54
VRK1-203ENST00000555067 CD207Q9UJ71 328 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms