RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 HLA-DPA1P20036 260 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 SPINK2P20155 84 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 CXCR5P32302 372 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 MMP12P39900 470 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 ARRB1P49407 418 aaPredicted RBP10.62□□□□□ -0.71
TMEM260-206ENST00000555046 LIMK1P53667 647 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 WNT3AP56704 352 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 YPEL5P62699 121 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 ACOX1Q15067 660 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 LIPIQ6XZB0 460 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 B4GALNT4Q76KP1 1039 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 GSTA5Q7RTV2 222 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 NLRP8Q86W28 1048 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 NRSN1Q8IZ57 195 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 RASGEF1CQ8N431 466 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 TMEM145Q8NBT3 493 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 LPCAT1Q8NF37 534 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 ACTRT1Q8TDG2 376 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 TADA1Q96BN2 335 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 CENPTQ96BT3 561 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 MCCC1Q96RQ3 725 aaPredicted RBP10.62□□□□□ -0.71
TMEM260-206ENST00000555046 ORAI3Q9BRQ5 295 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 TMEM121Q9BTD3 319 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 WRAP53Q9BUR4 548 aaKnown RBP10.62□□□□□ -0.71
TMEM260-206ENST00000555046 GTPBP2Q9BX10 602 aaKnown RBP10.62□□□□□ -0.71
TMEM260-206ENST00000555046 GBA3Q9H227 469 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 TRABDQ9H4I3 376 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 TMEM9BQ9NQ34 198 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM260-206ENST00000555046 HACD3Q9P035 362 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 B4GALT6Q9UBX8 382 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 SNX12Q9UMY4 172 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM260-206ENST00000555046 ATXN2Q99700 1313 aaKnown RBP10.61□□□□□ -0.71
TMEM260-206ENST00000555046 DOPEY1Q5JWR5 2465 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 APC2O95996 2303 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 A0A1B0GVT2 93 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 LOC285095A0A1B0GVY8 99 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 ERI2A8K979 691 aaKnown RBP10.61□□□□□ -0.71
TMEM260-206ENST00000555046 AP3B1O00203 1094 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 PGRMC1O00264 195 aaKnown RBP10.61□□□□□ -0.71
TMEM260-206ENST00000555046 TM4SF5O14894 197 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 GJB3O75712 270 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 RECQL5O94762 991 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-206ENST00000555046 HEXIM1O94992 359 aaKnown RBP10.61□□□□□ -0.71
TMEM260-206ENST00000555046 GAS8O95995 478 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 PRLP01236 227 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 PDHA1P08559 390 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 ZNF883P0CG24 379 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 C6P13671 934 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 NFKB1P19838 968 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 KELP23276 732 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 HTR1BP28222 390 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 CD68P34810 354 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-206ENST00000555046 HNF1BP35680 557 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 FDFT1P37268 417 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 PAFAH1B1P43034 410 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 SF3A2Q15428 464 aaKnown RBP10.61□□□□□ -0.71
TMEM260-206ENST00000555046 PCSK7Q16549 785 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 KIF19Q2TAC6 998 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 ZDHHC20Q5W0Z9 365 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 Q6ZSR6 202 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 ABI3BPQ7Z7G0 1075 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 LINC00523Q86TU6 105 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 ZSWIM9Q86XI8 627 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 SPATA22Q8NHS9 363 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 C1orf54Q8WWF1 131 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 KLK6Q92876 244 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 RTP4Q96DX8 246 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 SLC6A18Q96N87 628 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 OSBPL9Q96SU4 736 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 NAPGQ99747 312 aaPredicted RBP10.61□□□□□ -0.71
TMEM260-206ENST00000555046 HERPUD2Q9BSE4 406 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 EDEM2Q9BV94 578 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 CEP41Q9BYV8 373 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 EBF2Q9HAK2 575 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 PAK5Q9P286 719 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 PYCARDQ9ULZ3 195 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 ITM2BQ9Y287 266 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 SAR1BQ9Y6B6 198 aa10.61□□□□□ -0.71
TMEM260-206ENST00000555046 CHD5Q8TDI0 1954 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 A0A1W2PR77 199 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 TCRBV7S2A1N4TA0A589 114 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 LNP1A1A4G5 178 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 CAPN8A6NHC0 703 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 PATE3B3GLJ2 98 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 E7EVH7 732 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 PPFIA2O75334 1257 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 MT-CYBP00156 380 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 IFNB1P01574 187 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 ATP1A1P05023 1023 aaKnown RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 FGF1P05230 155 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 HOXC4P09017 264 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 THEGLP0DJG4 465 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 ITIH2P19823 946 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 BLKP51451 505 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 THOP1P52888 689 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 NXPH1P58417 271 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 PDE1BQ01064 536 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms