RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 ACOX1Q15067 660 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 PCSK7Q16549 785 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 LONRF2Q1L5Z9 754 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 P3H1Q32P28 736 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 LRRC66Q68CR7 880 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 PTAR1Q7Z6K3 402 aaPredicted RBP24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 TSPAN33Q86UF1 283 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 SPATS2Q86XZ4 545 aaKnown RBP24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 CCDC110Q8TBZ0 833 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 DTD2Q96FN9 168 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 MRGPRX2Q96LB1 330 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 NAP1L3Q99457 506 aaPredicted RBP24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 MBNL1Q9NR56 388 aaKnown RBP24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 UBP1Q9NZI7 540 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 DRG1Q9Y295 367 aaKnown RBP24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 TDRD6O60522 2096 aaKnown RBP24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 PCNX2A6NKB5 2137 aa24.25■■□□□ 1.47
SDR39U1-209ENST00000554947 A0A1B0GTQ1 180 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 TM4SF5O14894 197 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 HLA-DPA1P20036 260 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 STC1P52823 247 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 PTSQ03393 145 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 GALNT3Q14435 633 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 CDKN3Q16667 212 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 PARP6Q2NL67 630 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 ESRP1Q6NXG1 681 aaKnown RBP24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 ARHGEF18Q6ZSZ5 1173 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 TECPR1Q7Z6L1 1165 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 NLRP8Q86W28 1048 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 C1orf54Q8WWF1 131 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 NUS1Q96E22 293 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 OSBPL9Q96SU4 736 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 GORASP1Q9BQQ3 440 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 SNX12Q9UMY4 172 aa24.24■■□□□ 1.47
SDR39U1-209ENST00000554947 SPTBN4Q9H254 2564 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 GOLGA6CA6NDK9 693 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 GOLGA6BA6NDN3 693 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 GOLGA6DP0CG33 693 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 PSMB4P28070 264 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 ARRB1P49407 418 aaPredicted RBP24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 CCT8P50990 548 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 DPTQ07507 201 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 PTK2BQ14289 1009 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 PUM1Q14671 1186 aaKnown RBP eCLIP24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 ZNF765Q7L2R6 523 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 HSD11B1LQ7Z5J1 315 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 NRSN1Q8IZ57 195 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 SLC22A18ASQ8N1D0 253 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 OR2I1PQ8NGU4 316 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 FSD1LQ9BXM9 530 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 IL21RQ9HBE5 538 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 TM7SF3Q9NS93 570 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 GOLGA6AQ9NYA3 693 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 ZNF148Q9UQR1 794 aa24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 FNDC3AQ9Y2H6 1198 aaKnown RBP24.23■■□□□ 1.47
SDR39U1-209ENST00000554947 SPTY2D1-AS1A0A0U1RR47 76 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 RGSL1A5PLK6 1076 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 PCDHGA12O60330 932 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 HOXC4P09017 264 aaPredicted RBP24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 ATXN1LP0C7T5 689 aaKnown RBP24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 TEAD1P28347 426 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 GDF10P55107 478 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 PTPRRQ15256 657 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 SLC1A5Q15758 541 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 DBX2Q6ZNG2 339 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 KDELC2Q7Z4H8 507 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 CCHCR1Q8TD31 782 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 LRRC45Q96CN5 670 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 SMIM14Q96QK8 99 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 TRABDQ9H4I3 376 aa24.22■■□□□ 1.47
SDR39U1-209ENST00000554947 C1orf232A0A0U1RR37 186 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 CLDN7O95471 211 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 FGF1P05230 155 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 TSHRP16473 764 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 TCP1P17987 556 aaKnown RBP24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 ACTN2P35609 894 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 TRIM23P36406 574 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 ETV3P41162 512 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 GNG11P61952 73 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 INPP5AQ14642 412 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 SUZ12Q15022 739 aaKnown RBP24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 UAP1L1Q3KQV9 507 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 Q6ZVL8 140 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 IPMKQ8NFU5 416 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 ACTRT1Q8TDG2 376 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 ZFYVE1Q9HBF4 777 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 HACD3Q9P035 362 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 SCN8AQ9UQD0 1980 aa24.21■■□□□ 1.47
SDR39U1-209ENST00000554947 PGRMC1O00264 195 aaKnown RBP24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 PSMD3O43242 534 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 PYGLP06737 847 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 C1SP09871 688 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 CD59P13987 128 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 ADRA1AP35348 466 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 ID4P47928 161 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 THOP1P52888 689 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 PDE1CQ14123 709 aaPredicted RBP24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 SIRPB2Q5JXA9 342 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 DENND2CQ68D51 928 aa24.2■■□□□ 1.46
SDR39U1-209ENST00000554947 PNCKQ6P2M8 343 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms