RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SLC6A3Q01959 620 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 NAB1Q13506 487 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 SEMA5AQ13591 1074 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 CBX2Q14781 532 aaPredicted RBP15.69■□□□□ 0.1
SYNE3-203ENST00000554873 CTF1Q16619 201 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 STEAP4Q687X5 459 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 CCDC28AQ8IWP9 274 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 GATA5Q9BWX5 397 aaPredicted RBP15.69■□□□□ 0.1
SYNE3-203ENST00000554873 KIAA1257Q9ULG3 409 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 UGT2A1Q9Y4X1 527 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 PSAT1Q9Y617 370 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 MFN2O95140 757 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 TFEBP19484 476 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 ELK4P28324 431 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 GMPRP36959 345 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 ALDH7A1P49419 539 aaKnown RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 ADARB1P78563 741 aaKnown RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 FXNQ16595 210 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 PPP1R26Q5T8A7 1209 aaPredicted RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 KIAA1841Q6NSI8 718 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 HACE1Q8IYU2 909 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 BEND7Q8N7W2 519 aaPredicted RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 SHCBP1Q8NEM2 672 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 NT5C1AQ9BXI3 368 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 DHX35Q9H5Z1 703 aaKnown RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 EVPLQ92817 2033 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 UPK1BO75841 260 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 ATP6V1B2P21281 511 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 RPS9P46781 194 aaKnown RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 RACK1P63244 317 aaKnown RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 MRPS15P82914 257 aaKnown RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 INPP5AQ14642 412 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 MAPRE2Q15555 327 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 SMAD1Q15797 465 aaKnown RBP15.68■□□□□ 0.1
SYNE3-203ENST00000554873 LYSMD2Q8IV50 215 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 SPARTQ8N0X7 666 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 TTC9Q92623 222 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 DACH2Q96NX9 599 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 VPS35Q96QK1 796 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 CHID1Q9BWS9 393 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 SPC25Q9HBM1 224 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 MRGBPQ9NV56 204 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 GMIPQ9P107 970 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 TMEM181Q9P2C4 612 aa15.68■□□□□ 0.1
SYNE3-203ENST00000554873 DHRS12A0PJE2 317 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 AP3B1O00203 1094 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 MTSS1O43312 755 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 GPC4O75487 556 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 DAB1O75553 588 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 MSL3P1P0C860 447 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 PKLRP30613 574 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 SKIV2LQ15477 1246 aaKnown RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 TJAP1Q5JTD0 557 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 SNAP47Q5SQN1 464 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 REP15Q6BDI9 236 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 DDIASQ8IXT1 998 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 PSMA8Q8TAA3 256 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 GRPEL2Q8TAA5 225 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 BCL7BQ9BQE9 202 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 LRRC40Q9H9A6 602 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 GIMAP4Q9NUV9 329 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 MTMR10Q9NXD2 777 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 MFHAS1Q9Y4C4 1052 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 AQP12BA6NM10 295 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 H0YAE9 185 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 M0R3G1 203 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 GRIK1P39086 918 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 EIF2DP41214 584 aaKnown RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 PRKAA1Q13131 559 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 PLPPR4Q7Z2D5 763 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 ADCK1Q86TW2 530 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 AQP12AQ8IXF9 295 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 OR7A2PQ8NGA2 310 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 RHOXF1Q8NHV9 184 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 CPB2Q96IY4 423 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 QKIQ96PU8 341 aaKnown RBP eCLIP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 DEPDC7Q96QD5 511 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 TRIM15Q9C019 465 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 ASB7Q9H672 318 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 SOX17Q9H6I2 414 aaPredicted RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 AASDHPPTQ9NRN7 309 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 TBC1D13Q9NVG8 400 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 ARHGAP33O14559 1287 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 DNAJB5O75953 348 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 POLR2CP19387 275 aaPredicted RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 GMPSP49915 693 aaPredicted RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 CLCNKBP51801 687 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 SESN2P58004 480 aaPredicted RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 TNFAIP2Q03169 654 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 FCHO2Q0JRZ9 810 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 PCSK7Q16549 785 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 DPYSL2Q16555 572 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 PKDCCQ504Y2 493 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 HEATR6Q6AI08 1181 aaKnown RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 CMTR2Q8IYT2 770 aaKnown RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 POC5Q8NA72 575 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 PHF10Q8WUB8 498 aaKnown RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 ARNTL2Q8WYA1 636 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 SLC10A4Q96EP9 437 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms