RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 KIFC1Q9BW19 673 aa11.88□□□□□ -0.51
XRCC3-208ENST00000554811 USP22Q9UPT9 525 aa11.88□□□□□ -0.51
XRCC3-208ENST00000554811 SMIM31A0A1B0GVY4 71 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 FFAR3O14843 346 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 GSTA4O15217 222 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 MATN3O15232 486 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 GPR42O15529 346 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 MAFKO60675 156 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 SH3BGRLO75368 114 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 F2P00734 622 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 SQLEQ14534 574 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 INPP5AQ14642 412 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 TSNQ15631 228 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 SAMD4BQ5PRF9 694 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 LDLRAP1Q5SW96 308 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 CPNE9Q8IYJ1 553 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 FBXO39Q8N4B4 442 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 ADCY4Q8NFM4 1077 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 TWIST2Q8WVJ9 160 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 BTBD9Q96Q07 612 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 EGFL8Q99944 293 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 SPC25Q9HBM1 224 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 PADI3Q9ULW8 664 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 ANGPTL3Q9Y5C1 460 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 DHRS12A0PJE2 317 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 IQCF5A8MTL0 148 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 IRAK2O43187 625 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 PSMD3O43242 534 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 BCAS2O75934 225 aaPredicted RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 GOT2P00505 430 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 AGTR2P50052 363 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 HUNKP57058 714 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 MRPS6P82932 125 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 CDC42EP1Q00587 391 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 POU4F1Q01851 419 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 FRG1Q14331 258 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 POTEHQ6S545 545 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 GPR141Q7Z602 305 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 CLEC14AQ86T13 490 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 ABI1Q8IZP0 508 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 MTFMTQ96DP5 389 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 OAZ3Q9UMX2 235 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 DOLKQ9UPQ8 538 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 MYO9BQ13459 2157 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 NPEPPSL1A6NEC2 478 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 PABPC4LP0CB38 370 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 ATP6V1B2P21281 511 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 ARNTP27540 789 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 STT3AP46977 705 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 GSSP48637 474 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 KCTD11Q693B1 232 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 TMEM214Q6NUQ4 689 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 LINGO4Q6UY18 593 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 AGMOQ6ZNB7 445 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 OR7D4Q8NG98 312 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 NTAN1Q96AB6 310 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 C1QTNF1Q9BXJ1 281 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 PAIP1Q9H074 479 aaKnown RBP11.87□□□□□ -0.51
XRCC3-208ENST00000554811 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 RIMS3Q9UJD0 308 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 U3KQV3 271 aa11.87□□□□□ -0.51
XRCC3-208ENST00000554811 A0A087X1B8 175 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 SOCS2O14508 198 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 TPD52L2O43399 206 aaKnown RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 E2F6O75461 281 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 TRMUO75648 421 aaKnown RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 CHEK2O96017 543 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 KCNE1P15382 129 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 AXLP30530 894 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 ADARP55265 1226 aaKnown RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 ATP1A4Q13733 1029 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 IKBKEQ14164 716 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 PTPRNQ16849 979 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 INTS6LQ5JSJ4 861 aaKnown RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 UTS2BQ765I0 119 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 CLHC1Q8NHS4 586 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 FBXO30Q8TB52 745 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 KCTD14Q9BQ13 255 aaPredicted RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 MRPS26Q9BYN8 205 aaKnown RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 TBC1D13Q9NVG8 400 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 PCDHGC4Q9Y5F7 938 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 PCDHGA7Q9Y5G6 932 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 KNL1Q8NG31 2342 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 CCDC162PA2VCL2 907 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 AZIN1O14977 448 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 CCNCP24863 283 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 TIGD7Q6NT04 549 aaPredicted RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 MRNIPQ6NTE8 343 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 CYS1Q717R9 158 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 ZNF598Q86UK7 904 aaKnown RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 LGI2Q8N0V4 545 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 RDH11Q8TC12 318 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 FIG4Q92562 907 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 SLC9A7Q96T83 725 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 THUMPD3Q9BV44 507 aaKnown RBP11.86□□□□□ -0.51
XRCC3-208ENST00000554811 POLR1BQ9H9Y6 1135 aa11.86□□□□□ -0.51
XRCC3-208ENST00000554811 CDC7O00311 574 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms