RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ECSITQ9BQ95 431 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 ACBD6Q9BR61 282 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 B3GNT5Q9BYG0 378 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 TPSD1Q9BZJ3 242 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 FBRSL1Q9HCM7 1045 aaKnown RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 MRPL40Q9NQ50 206 aaKnown RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 HPS4Q9NQG7 708 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 PAPOLBQ9NRJ5 636 aaKnown RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 TMEM30AQ9NV96 361 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 THG1LQ9NWX6 298 aaKnown RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 CPSF2Q9P2I0 782 aaKnown RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 DKK4Q9UBT3 224 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 TJP2Q9UDY2 1190 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 VPS28Q9UK41 221 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 RAI2Q9Y5P3 530 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 SMIM31A0A1B0GVY4 71 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
SRP54-205ENST00000554803 TIMM44O43615 452 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 AP1G1O43747 822 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 FGF19O95750 216 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 ENO1P06733 434 aaKnown RBP11.2□□□□□ -0.62
SRP54-205ENST00000554803 CPB1P15086 417 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 PCSK1P29120 753 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 SERPINB5P36952 375 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 SLC1A6P48664 564 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 HSPA13P48723 471 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 HCAR3P49019 387 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 CACNA2D1P54289 1103 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 ZNF33AQ06730 810 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 RUNX3Q13761 415 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 HERC3Q15034 1050 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 RABGAP1LQ5R372 815 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 AP1ARQ63HQ0 302 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 FAM171BQ6P995 826 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 PGM2L1Q6PCE3 622 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 GAREM2Q75VX8 874 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 ZNF534Q76KX8 674 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 DHDDSQ86SQ9 333 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 RASSF3Q86WH2 238 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 LURAP1LQ8IV03 231 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 THEM5Q8N1Q8 247 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 HDDC3Q8N4P3 179 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 ANKRD52Q8NB46 1076 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 PCED1BQ96HM7 432 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 CNDP1Q96KN2 507 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 FAM83CQ9BQN1 747 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 ZCWPW1Q9H0M4 648 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 GKN1Q9NS71 199 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 PCMTD2Q9NV79 361 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 RRN3Q9NYV6 651 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 C6orf203Q9P0P8 240 aaPredicted RBP11.2□□□□□ -0.62
SRP54-205ENST00000554803 SLC7A8Q9UHI5 535 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 MBD1Q9UIS9 605 aaPredicted RBP11.2□□□□□ -0.62
SRP54-205ENST00000554803 ARHGAP26Q9UNA1 814 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 AP4E1Q9UPM8 1137 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 ANKRD6Q9Y2G4 727 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 HEY1Q9Y5J3 304 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 MAD1L1Q9Y6D9 718 aa11.2□□□□□ -0.62
SRP54-205ENST00000554803 OTOL1A6NHN0 477 aaPredicted RBP11.19□□□□□ -0.62
SRP54-205ENST00000554803 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 BEST1O76090 585 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 VNN2O95498 520 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 CSH1P0DML2 217 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 CSH2P0DML3 217 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 COL6A2P12110 1019 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 CPOXP36551 454 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 ALDH1A3P47895 512 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 NUMBP49757 651 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 GALK1P51570 392 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
SRP54-205ENST00000554803 EPHB3P54753 998 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 HDAC4P56524 1084 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 SMARCB1Q12824 385 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 GPR17Q13304 367 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 ITGA9Q13797 1035 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 SLC39A12Q504Y0 691 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 GPR158Q5T848 1215 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 TEDDM1Q5T9Z0 273 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 SCYL2Q6P3W7 929 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 NPNTQ6UXI9 565 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 PACS1Q6VY07 963 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 CDHR3Q6ZTQ4 885 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 ZNF605Q86T29 641 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 FAM35AQ86V20 835 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 SYT12Q8IV01 421 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 TSTD1Q8NFU3 115 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 OR6Y1Q8NGX8 325 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 WDR60Q8WVS4 1066 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 NCSTNQ92542 709 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 DLG3Q92796 817 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 CRELD1Q96HD1 420 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 CSPG4P5Q96PW8 444 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 HNRNPABQ99729 332 aaKnown RBP11.19□□□□□ -0.62
SRP54-205ENST00000554803 MED10Q9BTT4 135 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 THTPAQ9BU02 230 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 KLHL4Q9C0H6 718 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 LRRC40Q9H9A6 602 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 S100A14Q9HCY8 104 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms