RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 DESI2Q9BSY9 194 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 DUSP23Q9BVJ7 150 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 HEMGNQ9BXL5 484 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 BRD8Q9H0E9 1235 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 WDR26Q9H7D7 661 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 SUDS3Q9H7L9 328 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-213ENST00000554600 PCDH9Q9HC56 1237 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 EVA1BQ9NVM1 165 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 NLGN3Q9NZ94 848 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 SALL4Q9UJQ4 1053 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 DUSP10Q9Y6W6 482 aa10.68□□□□□ -0.7
SHMT2-213ENST00000554600 hCG_1818297A0A087WSY0 165 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 A0A0J9YYE9 177 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 A0A0U1RQS6 177 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 CPED1A4D0V7 1026 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 K7ESM1 405 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 TRBC1P01850 177 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 PTMAP06454 111 aaKnown RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 C1SP09871 688 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 MYF5P13349 255 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 JUPP14923 745 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 PECAM1P16284 738 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 TGM2P21980 687 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 LHCGRP22888 699 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 KELP23276 732 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 HNF1BP35680 557 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 CETN2P41208 172 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 NR2C2P49116 596 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 DUSP3P51452 185 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 CLDN6P56747 220 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 SRP54P61011 504 aaKnown RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 IFI35P80217 286 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 KIF5AQ12840 1032 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 PCSK7Q16549 785 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 PROX2Q3B8N5 592 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 LRRC66Q68CR7 880 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 ALG1LQ6GMV1 187 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 RAET1GQ6H3X3 334 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 Q6ZVL8 140 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 HSD11B1LQ7Z5J1 315 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 ZC3H18Q86VM9 953 aaKnown RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 EXD1Q8NHP7 514 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 ARRDC2Q8TBH0 407 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 TFB1MQ8WVM0 346 aaKnown RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 PIH1D2Q8WWB5 315 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 SPOCK2Q92563 424 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 KRT35Q92764 455 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 CALR3Q96L12 384 aaKnown RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 APOLD1Q96LR9 279 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 COQ10AQ96MF6 247 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 OLFM3Q96PB7 478 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 MCCC1Q96RQ3 725 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 RBM15Q96T37 977 aaKnown RBP eCLIP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 LRRC61Q9BV99 259 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 TDRD1Q9BXT4 1180 aaKnown RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 LACRTQ9GZZ8 138 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 PHPT1Q9NRX4 125 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 KCTD5Q9NXV2 234 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 CD84Q9UIB8 345 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 REXO2Q9Y3B8 237 aaKnown RBP10.67□□□□□ -0.7
SHMT2-213ENST00000554600 PCDHGA1Q9Y5H4 931 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 CSNK1G3Q9Y6M4 447 aa10.67□□□□□ -0.7
SHMT2-213ENST00000554600 SETXQ7Z333 2677 aaKnown RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 F5H423 210 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 H7C0C1 242 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 PSMD11O00231 422 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 PDE2AO00408 941 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 PJA2O43164 708 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 GCATO75600 419 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 TNFP01375 233 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 CDK4P11802 303 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 TSHRP16473 764 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 GM2AP17900 193 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 CTNNA2P26232 953 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 GPR1P46091 355 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 ATP5OP48047 213 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 HK3P52790 923 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 KIAA1024LP59773 190 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 SKOR1P84550 965 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 GALNT3Q14435 633 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 IHHQ14623 411 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 ELOCQ15369 112 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 CDKN3Q16667 212 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 ALG11Q2TAA5 492 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 CCDC70Q6NSX1 233 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 ESRP1Q6NXG1 681 aaKnown RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 ZCCHC8Q6NZY4 707 aaKnown RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 PNCKQ6P2M8 343 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 CRTC1Q6UUV9 634 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 TMPRSS7Q7RTY8 843 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 PEX26Q7Z412 305 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 NT5DC3Q86UY8 548 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 HEATR4Q86WZ0 1026 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 FSTL5Q8N475 847 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 CNTD1Q8N815 330 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 OR56A4Q8NGH8 313 aa10.66□□□□□ -0.7
SHMT2-213ENST00000554600 SCG3Q8WXD2 468 aaKnown RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 ZCCHC14Q8WYQ9 949 aaKnown RBP10.66□□□□□ -0.7
SHMT2-213ENST00000554600 GATA6Q92908 595 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms