RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	NAA35	Q5VZE5	725 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	METRNL	Q641Q3	311 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CATSPER4	Q7RTX7	472 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KRT73	Q86Y46	540 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TTC39C	Q8N584	583 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TRPV1	Q8NER1	839 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	DNAJB3	Q8WWF6	145 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CD101	Q93033	1021 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TSPAN18	Q96SJ8	248 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	NAP1L3	Q99457	506 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	NUP85	Q9BW27	656 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SLC46A2	Q9BY10	475 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ARHGAP39	Q9C0H5	1083 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PABPC3	Q9H361	631 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SEC61A2	Q9H9S3	476 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CYP3A43	Q9HB55	503 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MSL2	Q9HCI7	577 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	EHD2	Q9NZN4	543 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KIF17	Q9P2E2	1029 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CNOT8	Q9UFF9	292 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	BRCA2	P51587	3418 aa		4.89	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PTPRD	P23468	1912 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	AQP7P3	A6NL99	342 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CEP104	O60308	925 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PIAS2	O75928	621 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	FAM155B	O75949	473 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ACTL6B	O94805	426 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TOMM70	O94826	608 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RASAL1	O95294	804 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CALCA	P01258	141 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KRT19	P08727	400 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PAEP	P09466	180 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	WEE2	P0C1S8	567 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ATXN1L	P0C7T5	689 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	JUP	P14923	745 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CD58	P19256	250 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	COMT	P21964	271 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	FGFR4	P22455	802 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MMP8	P22894	467 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RRM1	P23921	792 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CST5	P28325	142 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TNFRSF8	P28908	595 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CDH5	P33151	784 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CTNNA1	P35221	906 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	DNA2	P51530	1060 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CRYBB1	P53674	252 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PRKAA2	P54646	552 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TNNC1	P63316	161 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PIGF	Q07326	219 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	INCA1	Q0VD86	236 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PTP4A2	Q12974	167 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MESD	Q14696	234 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ZBTB6	Q15916	424 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MGAT5B	Q3V5L5	792 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	LIN9	Q5TKA1	542 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MANEAL	Q5VSG8	457 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PLEKHA7	Q6IQ23	1121 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	C8orf74	Q6P047	294 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ALKAL1	Q6UXT8	129 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ARHGEF18	Q6ZSZ5	1173 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CPO	Q8IVL8	374 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	HERC6	Q8IVU3	1022 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	UBL4B	Q8N7F7	174 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MDGA1	Q8NFP4	955 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SCAMP5	Q8TAC9	235 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	BPIFB1	Q8TDL5	484 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	HPDL	Q96IR7	371 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	OR14A2	Q96R54	314 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ZSWIM1	Q9BR11	485 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MTG1	Q9BT17	334 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	LRRC1	Q9BTT6	524 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	FUT8	Q9BYC5	575 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	EPS8L2	Q9H6S3	715 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MRPL47	Q9HD33	250 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PRDM8	Q9NQV8	689 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	DPP3	Q9NY33	737 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SMARCAL1	Q9NZC9	954 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ADAM22	Q9P0K1	906 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	HSFX1	Q9UBD0	423 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	HECA	Q9UBI9	543 aa	Predicted RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	GABRQ	Q9UN88	632 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SHOC2	Q9UQ13	582 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CLCA2	Q9UQC9	943 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	GINS2	Q9Y248	185 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MRPS17	Q9Y2R5	130 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SCIN	Q9Y6U3	715 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TSC2	P49815	1807 aa		4.88	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MYADML2	A6NDP7	307 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MAP2K7	O14733	419 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MED7	O43513	233 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	DNPH1	O43598	174 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	COQ9	O75208	318 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SEC31A	O94979	1220 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	GLP2R	O95838	553 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CALB1	P05937	261 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	INHBB	P09529	407 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CTNNA2	P26232	953 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MGAT1	P26572	445 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms