RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 NXPE2Q96DL1 559 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 NUS1Q96E22 293 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 DEPDC7Q96QD5 511 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 MCCC1Q96RQ3 725 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CLPBQ9H078 707 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 ABCG4Q9H172 646 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 CAAP1Q9H8G2 361 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 DDX56Q9NY93 547 aaKnown RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 DTLQ9NZJ0 730 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 DNPEPQ9ULA0 475 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 PNMA8BQ9ULN7 279 aaPredicted RBP8.74□□□□□ -1.01
ACTN1-213ENST00000554508 DOLKQ9UPQ8 538 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 OR1A2Q9Y585 309 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 RAI2Q9Y5P3 530 aa8.74□□□□□ -1.01
ACTN1-213ENST00000554508 PKD1L2Q7Z442 2459 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 A0A0J9YYE9 177 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 CPED1A4D0V7 1026 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 LRRD1A4D1F6 860 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 APOL1O14791 398 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 FZD6O60353 706 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 LCA5LO95447 670 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 TRBC1P01850 177 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 PTMAP06454 111 aaKnown RBP8.73□□□□□ -1.01
ACTN1-213ENST00000554508 PYGLP06737 847 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 ZNF30P17039 623 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 MAGEA1P43355 309 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 EPHB1P54762 984 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 CLDN6P56747 220 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 RPL26P61254 145 aaKnown RBP8.73□□□□□ -1.01
ACTN1-213ENST00000554508 GBE1Q04446 702 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 DPTQ07507 201 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 CDKN3Q16667 212 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 SLC9A4Q6AI14 798 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 EFL1Q7Z2Z2 1120 aaKnown RBP8.73□□□□□ -1.01
ACTN1-213ENST00000554508 RD3Q7Z3Z2 195 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 NLRP8Q86W28 1048 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 RHOT1Q8IXI2 618 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 PLD5Q8N7P1 536 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 MAPK15Q8TD08 544 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 NAT6Q93015 286 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 GRAMD1AQ96CP6 724 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 DTD2Q96FN9 168 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 RBM15Q96T37 977 aaKnown RBP eCLIP8.73□□□□□ -1.01
ACTN1-213ENST00000554508 BRD8Q9H0E9 1235 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 WDR26Q9H7D7 661 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 LUC7LQ9NQ29 371 aaKnown RBP8.73□□□□□ -1.01
ACTN1-213ENST00000554508 PHPT1Q9NRX4 125 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-213ENST00000554508 PADI4Q9UM07 663 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 RPL26L1Q9UNX3 145 aaKnown RBP8.73□□□□□ -1.01
ACTN1-213ENST00000554508 EPN1Q9Y6I3 576 aaPredicted RBP8.73□□□□□ -1.01
ACTN1-213ENST00000554508 AK5Q9Y6K8 562 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 LAMA5O15230 3695 aa8.73□□□□□ -1.01
ACTN1-213ENST00000554508 COL27A1Q8IZC6 1860 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 TMEM202A6NGA9 273 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 NPIPB15A6NHN6 443 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 C3orf70A6NLC5 250 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 PPP1R12AO14974 1030 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 SPOPO43791 374 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 NRDCO43847 1150 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 TCEA3O75764 348 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 NDUFA10O95299 355 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 MAP3K6O95382 1288 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 JCHAINP01591 159 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 HLA-DQB2P05538 268 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 PDHA1P08559 390 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 MYCLP1P12525 358 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 MYF5P13349 255 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 CTPS1P17812 591 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 FECHP22830 423 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 ETV3P41162 512 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 NOP2P46087 812 aaKnown RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 NR2C2P49116 596 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 IFI35P80217 286 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 DSC2Q02487 901 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 PPIDQ08752 370 aaKnown RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 PDK1Q15118 436 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 DENND2CQ68D51 928 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 GUSBP11Q6P575 273 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 RAD9BQ6WBX8 426 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 BZW1Q7L1Q6 419 aaKnown RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 HSD11B1LQ7Z5J1 315 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 TECPR1Q7Z6L1 1165 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 TMEM139Q8IV31 216 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 LRRC8AQ8IWT6 810 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 SLC35F3Q8IY50 421 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 NRSN1Q8IZ57 195 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 ARL10Q8N8L6 244 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 CCDC112Q8NEF3 446 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 ARRDC2Q8TBH0 407 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 PDXPQ96GD0 296 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 CALR3Q96L12 384 aaKnown RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 LGMNQ99538 433 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 TDRD1Q9BXT4 1180 aaKnown RBP8.72□□□□□ -1.01
ACTN1-213ENST00000554508 TEX101Q9BY14 249 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 PCDH9Q9HC56 1237 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 CYP4F12Q9HCS2 524 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 GPR34Q9UPC5 381 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 GPSM3Q9Y4H4 160 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 TTLL3Q9Y4R7 772 aa8.72□□□□□ -1.01
ACTN1-213ENST00000554508 PCDHA13Q9Y5I0 950 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms