RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 FGF22Q9HCT0 170 aa11.13□□□□□ -0.63
ABCD4-221ENST00000554453 NT5MQ9NPB1 228 aa11.13□□□□□ -0.63
ABCD4-221ENST00000554453 ASCL3Q9NQ33 180 aa11.13□□□□□ -0.63
ABCD4-221ENST00000554453 CTTNBP2NLQ9P2B4 639 aa11.13□□□□□ -0.63
ABCD4-221ENST00000554453 AMACRQ9UHK6 382 aa11.13□□□□□ -0.63
ABCD4-221ENST00000554453 PCDHGA8Q9Y5G5 932 aa11.13□□□□□ -0.63
ABCD4-221ENST00000554453 LRP4O75096 1905 aa11.13□□□□□ -0.63
ABCD4-221ENST00000554453 TMX2-CTNND1H3BSU7 103 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 CPP00450 1065 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 FUCA1P04066 466 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 PDHA1P08559 390 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 KRT7P08729 469 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 KRT10P13645 584 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 PNLIPP16233 465 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 TAS2R40P59535 323 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 CCL7P80098 99 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 PTSQ03393 145 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 DPTQ07507 201 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 CCDC173Q0VFZ6 552 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 SPIDRQ14159 915 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 IHHQ14623 411 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 IFI16Q16666 785 aaKnown RBP11.12□□□□□ -0.63
ABCD4-221ENST00000554453 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
ABCD4-221ENST00000554453 NCBP2-AS2Q69YL0 99 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 ALG1LQ6GMV1 187 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 TIGD7Q6NT04 549 aaPredicted RBP11.12□□□□□ -0.63
ABCD4-221ENST00000554453 CRTC1Q6UUV9 634 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 Q6ZVL8 140 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 HSD11B1LQ7Z5J1 315 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 CPNE8Q86YQ8 564 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 SPACA3Q8IXA5 215 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 FAM46DQ8NEK8 389 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 WDR36Q8NI36 951 aaKnown RBP11.12□□□□□ -0.63
ABCD4-221ENST00000554453 GPBAR1Q8TDU6 330 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 FAF2Q96CS3 445 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 NUS1Q96E22 293 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 DTD2Q96FN9 168 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 BBC3Q96PG8 261 aaPredicted RBP11.12□□□□□ -0.63
ABCD4-221ENST00000554453 DNAJC7Q99615 494 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 ZNF670Q9BS34 389 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 TMEM168Q9H0V1 697 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 WDR26Q9H7D7 661 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 CYP4F12Q9HCS2 524 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 MRPL40Q9NQ50 206 aaKnown RBP11.12□□□□□ -0.63
ABCD4-221ENST00000554453 PHPT1Q9NRX4 125 aaPredicted RBP11.12□□□□□ -0.63
ABCD4-221ENST00000554453 THSD1Q9NS62 852 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 RBM22Q9NW64 420 aaKnown RBP eCLIP11.12□□□□□ -0.634e-6■■□□□ 13.3
ABCD4-221ENST00000554453 SIRPGQ9P1W8 387 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 RABGEF1Q9UJ41 708 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 APPL1Q9UKG1 709 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 SATB2Q9UPW6 733 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
ABCD4-221ENST00000554453 COL27A1Q8IZC6 1860 aaPredicted RBP11.12□□□□□ -0.63
ABCD4-221ENST00000554453 A0A1W2PQM1 296 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 PRSS38A1L453 326 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 NPIPB15A6NHN6 443 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 CASC3O15234 703 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 CBFA2T2O43439 604 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 NOBOXO60393 691 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 PRLP01236 227 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 CEACAM5P06731 702 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 MYCLP1P12525 358 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 GLB1P16278 677 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 LHCGRP22888 699 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 KDELR1P24390 212 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 RBMS1P29558 406 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 ETV3P41162 512 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 MLLT3P42568 568 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 PCBP4P57723 403 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 SKOR1P84550 965 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 TLE3Q04726 772 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 SLC10A2Q12908 348 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 TRIM14Q14142 442 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 ARHGEF7Q14155 803 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 PTPRRQ15256 657 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 TCEA2Q15560 299 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 C3orf38Q5JPI3 329 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 SPECC1LQ69YQ0 1117 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 USP45Q70EL2 814 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 C17orf82Q86X59 251 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 RAVER1Q8IY67 606 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 PQLC3Q8N755 202 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 KYQ8NBH2 561 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 LSM14AQ8ND56 463 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 CCL4L1Q8NHW4 92 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 ARRDC2Q8TBH0 407 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 CTNNBL1Q8WYA6 563 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 CCDC74AQ96AQ1 378 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 PDXPQ96GD0 296 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 RNF157Q96PX1 679 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 GFM1Q96RP9 751 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 PACSIN1Q9BY11 444 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 DPH1Q9BZG8 443 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 POLR1EQ9GZS1 481 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 LRRN3Q9H3W5 708 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 ZNHIT6Q9NWK9 470 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 TRNAU1APQ9NX07 287 aaKnown RBP11.11□□□□□ -0.63
ABCD4-221ENST00000554453 MOSPD1Q9UJG1 213 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 CELSR3Q9NYQ7 3312 aa11.11□□□□□ -0.63
ABCD4-221ENST00000554453 BAHCC1Q9P281 2608 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms