RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SLC39A12Q504Y0 691 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 ATL3Q6DD88 541 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 KIAA1211LQ6NV74 962 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 FOXR2Q6PJQ5 311 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 TRIM72Q6ZMU5 477 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SLCO4C1Q6ZQN7 724 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 C11orf57Q6ZUT1 292 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 HTR3DQ70Z44 454 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 RHOUQ7L0Q8 258 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 HDXQ7Z353 690 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 KRT25Q7Z3Z0 450 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 WDR5BQ86VZ2 330 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SYT2Q8N9I0 419 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 CCDC112Q8NEF3 446 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 LPCAT1Q8NF37 534 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 BEST2Q8NFU1 509 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 FBXO18Q8NFZ0 1043 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 CFAP61Q8NHU2 1237 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 KIF18AQ8NI77 898 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 LNX1Q8TBB1 728 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 BCAS4Q8TDM0 211 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 CSGALNACT1Q8TDX6 532 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 ADAMTS15Q8TE58 950 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 STYXQ8WUJ0 223 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 DEPDC1BQ8WUY9 529 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 PSPC1Q8WXF1 523 aaKnown RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 WASF1Q92558 559 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SLC9A6Q92581 669 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 JADE3Q92613 823 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 PPP1R14AQ96A00 147 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 CYFIP2Q96F07 1278 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF274Q96GC6 653 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM41AQ96HV5 264 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 CITED2Q99967 270 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 FDXACB1Q9BRP7 624 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 C9orf16Q9BUW7 83 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 DRC3Q9H069 523 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 FZD8Q9H461 694 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 RAD21L1Q9H4I0 556 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 DENND2DQ9H6A0 471 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 CBX8Q9HC52 389 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 FAM114A2Q9NRY5 505 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 RXFP3Q9NSD7 469 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 WHRNQ9P202 907 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 DNAJB4Q9UDY4 337 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 ADAM28Q9UKQ2 775 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 RNF24Q9Y225 148 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 MRPS17Q9Y2R5 130 aaKnown RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 PCDHB5Q9Y5E4 795 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 SNX14Q9Y5W7 946 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 GMEB1Q9Y692 573 aa2.74□□□□□ -1.97
PRPF39-206ENST00000554429 BZW2Q9Y6E2 419 aaKnown RBP2.74□□□□□ -1.97
PRPF39-206ENST00000554429 A0A1B0GWJ7 208 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM247A6NEH6 219 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ARL5CA6NH57 179 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FAM47DPA6NHR8 397 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM229AB2RXF0 380 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 HSBP1L1C9JCN9 74 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 N4BP3O15049 544 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TGM5O43548 720 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 NARSO43776 548 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GMFGO60234 142 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 XYLBO75191 536 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CLN5O75503 358 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TMCC1O94876 653 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 HEXIM1O94992 359 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AKR7A3O95154 331 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KCNK5O95279 499 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MBD3O95983 291 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GLI1P08151 1106 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MMP2P08253 660 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 HSMCR30P0CW71 290 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TMIGD3P0DMS9 266 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CLUP10909 449 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 POU3F2P20265 443 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CFL1P23528 166 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 NR2F2P24468 414 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 STAT5AP42229 794 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AFMP43652 599 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ACADSBP45954 432 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF165P49910 485 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PRRX1P54821 245 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RAB15P59190 212 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TYRO3Q06418 890 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LAMTOR4Q0VGL1 99 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FOXO1Q12778 655 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GRSF1Q12849 480 aaKnown RBP eCLIP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TRAP1Q12931 704 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CHAF1BQ13112 559 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TUSC3Q13454 348 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DRP2Q13474 957 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SLC12A1Q13621 1099 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RAPSNQ13702 412 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CASP8Q14790 479 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CSRP2Q16527 193 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AANATQ16613 207 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SMU1Q2TAY7 513 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SV2CQ496J9 727 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SLC44A4Q53GD3 710 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms