RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RNF103O00237 685 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 PLK4O00444 970 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 HNRNPDLO14979 420 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 HOXC11O43248 304 aaPredicted RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 TGFB1I1O43294 461 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 AKR1B10O60218 316 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 VNN1O95497 513 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 NFATC1O95644 943 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 FGF19O95750 216 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 IRF1P10914 325 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 MBL2P11226 248 aaPredicted RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 HLA-EP13747 358 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 HOXB2P14652 356 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 WARSP23381 471 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 GCSHP23434 173 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 PRKCHP24723 683 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 GJB2P29033 226 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ADSLP30566 484 aaPredicted RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 MATR3P43243 847 aaKnown RBP eCLIP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 MAGEA11P43364 429 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 TNFRSF4P43489 277 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 TRAPPC10P48553 1259 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 CSNK1EP49674 416 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SGSHP51688 502 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ANAPC15P60006 121 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 MRPS35P82673 323 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 TFAMQ00059 246 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 IL9RQ01113 521 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 LMAN2Q12907 356 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 STRN3Q13033 797 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 DNAJC3Q13217 504 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ORC2Q13416 577 aaPredicted RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ENPP2Q13822 863 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 VEPH1Q14D04 833 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 KIF19Q2TAC6 998 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 HLA-BQ31612 363 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 FUT11Q495W5 492 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 C1orf220Q5T0J3 134 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 C10orf76Q5T2E6 689 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 L1TD1Q5T7N2 865 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 DCAF12L1Q5VU92 463 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 KRT79Q5XKE5 535 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 DHRS13Q6UX07 377 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 TPGS1Q6ZTW0 290 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 DENND5BQ6ZUT9 1274 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 Q6ZVL8 140 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 MICALCLQ6ZW33 695 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SCD5Q86SK9 330 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 CACUL1Q86Y37 369 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SPATA2LQ8IUW3 424 aaPredicted RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 DRC7Q8IY82 874 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 DCP1BQ8IZD4 617 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 AHI1Q8N157 1196 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 THEM5Q8N1Q8 247 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ZCCHC9Q8N567 271 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SH2D3CQ8N5H7 860 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF366Q8N895 744 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 OR7D4Q8NG98 312 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SPATA18Q8TC71 538 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 WFDC5Q8TCV5 224 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ACTRT2Q8TDY3 377 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SCARB1Q8WTV0 552 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 NDRG1Q92597 394 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SPATA17Q96L03 361 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 TIPINQ9BVW5 301 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 REXO4Q9GZR2 422 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 C6orf106Q9H6K1 298 aaPredicted RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SMYD3Q9H7B4 428 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 BCO1Q9HAY6 547 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 PRDM16Q9HAZ2 1276 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 PARVGQ9HBI0 331 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 GALNT9Q9HCQ5 603 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SPHK2Q9NRA0 654 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 INTS13Q9NVM9 706 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 DKK4Q9UBT3 224 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 SERGEFQ9UGK8 458 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ODF2LQ9ULJ1 636 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 ZZEF1O43149 2961 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 CABIN1Q9Y6J0 2220 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 MYH10P35580 1976 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 PKD1L2Q7Z442 2459 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 DMXL2Q8TDJ6 3036 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 TBC1D3BA6NDS4 549 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 CLIC2O15247 247 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 CACNG3O60359 315 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 PROP1O75360 226 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 PRSS23O95084 383 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GPANK1O95872 356 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 APODP05090 189 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 KRT19P08727 400 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 GIMD1P0DJR0 217 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 MYF5P13349 255 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 CCDC130P13994 396 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 TYRP14679 529 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 NTSR1P30989 418 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 ACSL1P33121 698 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 DDIT3P35638 169 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 EIF2DP41214 584 aaKnown RBP3.3□□□□□ -1.88
SLIRP-202ENST00000553981 ABCG1P45844 678 aa3.3□□□□□ -1.88
SLIRP-202ENST00000553981 TPMTP51580 245 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms