RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CWF19L1Q69YN2 538 aaKnown RBP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 PDPK2PQ6A1A2 396 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 KIAA1161Q6NSJ0 714 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 NEK5Q6P3R8 708 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 AFTPHQ6ULP2 937 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 CYS1Q717R9 158 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 LYSMD3Q7Z3D4 306 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 CACUL1Q86Y37 369 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 PGBD3Q8N328 593 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 MPP5Q8N3R9 675 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 AADATQ8N5Z0 425 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 HMGB4Q8WW32 186 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 SCG3Q8WXD2 468 aaKnown RBP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 C9orf72Q96LT7 481 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 CCDC77Q9BR77 488 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 FAM167BQ9BTA0 163 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 C1QTNF7Q9BXJ2 289 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 SGK2Q9HBY8 427 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 NLE1Q9NVX2 485 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 POLR3BQ9NW08 1133 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-210ENST00000553950 NSMCE4AQ9NXX6 385 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 APPL1Q9UKG1 709 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 SPO11Q9Y5K1 396 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 TRPM6Q9BX84 2022 aa14.52□□□□□ -0.09
SHMT2-210ENST00000553950 A0A1W2PP55 124 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 ANTXRLA6NF34 631 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 H7C0S8 307 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 PFDN6O15212 129 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 PLRG1O43660 514 aaKnown RBP14.51□□□□□ -0.09
SHMT2-210ENST00000553950 BANF1O75531 89 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 IGLV3-19P01714 112 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 SLC4A1P02730 911 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 PIRTP0C851 137 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 PSMA3P25788 255 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 SPAM1P38567 509 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 CXCL12P48061 93 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 STC1P52823 247 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 EIF3BP55884 814 aaKnown RBP14.51□□□□□ -0.09
SHMT2-210ENST00000553950 TMEM52BQ4KMG9 183 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 ANKRD20A4Q4UJ75 823 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 AARS2Q5JTZ9 985 aaKnown RBP14.51□□□□□ -0.09
SHMT2-210ENST00000553950 BEND6Q5SZJ8 279 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-210ENST00000553950 FBXO38Q6PIJ6 1188 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 UNC5AQ6ZN44 842 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 CROCCP2Q86T23 111 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 RASSF3Q86WH2 238 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 CBARPQ8N350 705 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-210ENST00000553950 TTC30BQ8N4P2 665 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 CERS2Q96G23 380 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 PLEKHG4BQ96PX9 1271 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 WDR83Q9BRX9 315 aaKnown RBP14.51□□□□□ -0.09
SHMT2-210ENST00000553950 FUT8Q9BYC5 575 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 ACBD3Q9H3P7 528 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 TREX1Q9NSU2 369 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 USP36Q9P275 1121 aaKnown RBP14.51□□□□□ -0.09
SHMT2-210ENST00000553950 FADS3Q9Y5Q0 445 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 ARL5AQ9Y689 179 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.51□□□□□ -0.09
SHMT2-210ENST00000553950 FAM169AQ9Y6X4 670 aa14.51□□□□□ -0.09
SHMT2-210ENST00000553950 LRRC72A6NJI9 287 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 ACSL3O95573 720 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 PRKCGP05129 697 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 PYGLP06737 847 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 NUDT17P0C025 328 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 LHCGRP22888 699 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 PPARGP37231 505 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-210ENST00000553950 ADPRHP54922 357 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 RALGDSQ12967 914 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 CNGA3Q16281 694 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 ANO7Q6IWH7 933 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 CRTC1Q6UUV9 634 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 C3orf62Q6ZUJ4 267 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 ZNF765Q7L2R6 523 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 CYP2U1Q7Z449 544 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 NRSN1Q8IZ57 195 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 AGGF1Q8N302 714 aaeCLIP14.5□□□□□ -0.09
SHMT2-210ENST00000553950 MDGA1Q8NFP4 955 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 DTX3LQ8TDB6 740 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 SGSM3Q96HU1 749 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 DNAJC1Q96KC8 554 aaKnown RBP14.5□□□□□ -0.09
SHMT2-210ENST00000553950 SPACA7Q96KW9 195 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 HHIPQ96QV1 700 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 RUFY1Q96T51 708 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 TTC1Q99614 292 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 BTBD1Q9H0C5 482 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 LRRC4CQ9HCJ2 640 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 CHRAC1Q9NRG0 131 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 IL17CQ9P0M4 197 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 FETUBQ9UGM5 382 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 EBF1Q9UH73 591 aa14.5□□□□□ -0.09
SHMT2-210ENST00000553950 CCDC163A0A0D9SF12 145 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 DCNP07585 359 aaKnown RBP14.49□□□□□ -0.09
SHMT2-210ENST00000553950 ITGALP20701 1170 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 HOXA6P31267 233 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 NUDT1P36639 197 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 HSD17B3P37058 310 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 RPS21P63220 83 aaKnown RBP14.49□□□□□ -0.09
SHMT2-210ENST00000553950 MGAT5Q09328 741 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 MTAPQ13126 283 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms