RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 IL17RCQ8NAC3 791 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 TSEN2Q8NCE0 465 aaKnown RBP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 SPATA22Q8NHS9 363 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 ARRDC2Q8TBH0 407 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 ISG20Q96AZ6 181 aaKnown RBP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 ZNF419Q96HQ0 510 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 HSPA12BQ96MM6 686 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 NUDCD1Q96RS6 583 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 GORASP1Q9BQQ3 440 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CCDC77Q9BR77 488 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CEP44Q9C0F1 390 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CASS4Q9NQ75 786 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 NINJ2Q9NZG7 142 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 INTS6Q9UL03 887 aaKnown RBP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 HS3ST2Q9Y278 367 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 TEP1Q99973 2627 aaKnown RBP14.56□□□□□ -0.08
SHMT2-208ENST00000553868 NBPF19A0A087WUL8 3843 aa14.56□□□□□ -0.08
SHMT2-208ENST00000553868 CHD5Q8TDI0 1954 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 MYO18AQ92614 2054 aaKnown RBP14.55□□□□□ -0.08
SHMT2-208ENST00000553868 INSIG1O15503 277 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 TIMM44O43615 452 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 ADAM23O75077 832 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 WISP1O95388 367 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 IGSF6O95976 241 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 MT-CYBP00156 380 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-208ENST00000553868 EPOP01588 193 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 ABHD2P08910 425 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 NUDT17P0C025 328 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 MAOBP27338 520 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 EIF2DP41214 584 aaKnown RBP14.55□□□□□ -0.08
SHMT2-208ENST00000553868 CSNK1DP48730 415 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 VASPP50552 380 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-208ENST00000553868 AP1S1P61966 158 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 SKOR1P84550 965 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 ECT2LQ008S8 904 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 SEMG2Q02383 582 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 IFFO1Q0D2I5 559 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 NIPAL4Q0D2K0 466 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 EIF4HQ15056 248 aaKnown RBP14.55□□□□□ -0.08
SHMT2-208ENST00000553868 GAB4Q2WGN9 574 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 FAM182AQ5T1J6 154 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 MBLAC2Q68D91 279 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 KDELC1Q6UW63 502 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 LRRC69Q6ZNQ3 347 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 NUDT18Q6ZVK8 323 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 ZNF534Q76KX8 674 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 PRPF39Q86UA1 669 aaKnown RBP14.55□□□□□ -0.08
SHMT2-208ENST00000553868 ETFBKMTQ8IXQ9 262 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 TTC17Q96AE7 1141 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 TADA1Q96BN2 335 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 ERLEC1Q96DZ1 483 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 IFT43Q96FT9 208 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 FEM1CQ96JP0 617 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 C9orf72Q96LT7 481 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 FICDQ9BVA6 458 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 UBP1Q9NZI7 540 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 TEX264Q9Y6I9 313 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 KNTC1P50748 2209 aa14.55□□□□□ -0.08
SHMT2-208ENST00000553868 A0A087WUV0 522 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 TEX51A0A1B0GUA7 166 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 MAGEB16A2A368 324 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 MUSKO15146 869 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 TULP3O75386 442 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 ACSL3O95573 720 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 CD160O95971 181 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 IVLP07476 585 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 SRPRAP08240 638 aaKnown RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 CISD3P0C7P0 127 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 CR2P20023 1033 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 HLA-DPA1P20036 260 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 ELK3P41970 407 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 NUMBP49757 651 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 SCNN1BP51168 640 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 CLDN6P56747 220 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 SESN2P58004 480 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 SNRPD1P62314 119 aaKnown RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 MRPS21P82921 87 aaKnown RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 LAMB3Q13751 1172 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 SPARCL1Q14515 664 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 UAP1Q16222 522 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 KYNUQ16719 465 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 MSS51Q4VC12 460 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 TAF1BQ53T94 588 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 CASC4Q6P4E1 433 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 RABEPKQ7Z6M1 372 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 ANKMY2Q8IV38 441 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 RGL4Q8IZJ4 473 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 IQCKQ8N0W5 287 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 GALNT15Q8N3T1 639 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 PCDH20Q8N6Y1 951 aaKnown RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 GOLGA6L1Q8N7Z2 621 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 FBXO36Q8NEA4 188 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 OR52K1Q8NGK4 314 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 BAHD1Q8TBE0 780 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 STAMBPL1Q96FJ0 436 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 MRGPRX2Q96LB1 330 aa14.54□□□□□ -0.08
SHMT2-208ENST00000553868 EBNA1BP2Q99848 306 aaKnown RBP14.54□□□□□ -0.08
SHMT2-208ENST00000553868 IL22Q9GZX6 179 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms