RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 EREGO14944 169 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 MMP20O60882 483 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 JCHAINP01591 159 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ITGAVP06756 1048 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ELFN1P0C7U0 828 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ZNF883P0CG24 379 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 THEGLP0DJG4 465 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 MSNP26038 577 aaKnown RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 RABIFP47224 123 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 RGRP47804 291 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ATP5OP48047 213 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 NOVA1P51513 510 aaKnown RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 THOP1P52888 689 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 PTK2BQ14289 1009 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 TMEM52BQ4KMG9 183 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 LRRC73Q5JTD7 316 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 SEL1L2Q5TEA6 688 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 MEI1Q5TIA1 1274 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 SEL1L3Q68CR1 1132 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ERMP1Q7Z2K6 904 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 TEX26Q8N6G2 289 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ATL2Q8NHH9 583 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 PMEPA1Q969W9 287 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 LENG8Q96PV6 779 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 LGMNQ99538 433 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ELF4Q99607 663 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 WRAP53Q9BUR4 548 aaKnown RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 HEMGNQ9BXL5 484 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ADGRE3Q9BY15 652 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 OSBPL8Q9BZF1 889 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 NOD2Q9HC29 1040 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 PCDH12Q9NPG4 1184 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 TM7SF3Q9NS93 570 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 RXFP3Q9NSD7 469 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 EFR3BQ9Y2G0 817 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 REXO2Q9Y3B8 237 aaKnown RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 PCDHGC4Q9Y5F7 938 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 PCDHGB7Q9Y5F8 929 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 RAI2Q9Y5P3 530 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 EML5Q05BV3 1969 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 SPAG17Q6Q759 2223 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 ABCA7Q8IZY2 2146 aa8.38□□□□□ -1.07
PSEN1-209ENST00000553855 EP300Q09472 2414 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-209ENST00000553855 OTOGLQ3ZCN5 2332 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 GRID2IPA4D2P6 1211 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 H3BM21 787 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 APOC4-APOC2K7ER74 178 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 KCNK1O00180 336 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 AREL1O15033 823 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 FLRT2O43155 660 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 ZSCAN12O43309 604 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 HTRA2O43464 458 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 FTCDO95954 541 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 PEX11BO96011 259 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 APOC2P02655 101 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 C6P13671 934 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 CSRP1P21291 193 aaKnown RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 HTR1BP28222 390 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 VIPR1P32241 457 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 CTSKP43235 329 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 LIG3P49916 1009 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 NXPH1P58417 271 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 RPL26P61254 145 aaKnown RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 IFI35P80217 286 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 XRCC4Q13426 336 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 PRPSAP1Q14558 356 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 LRRC14Q15048 493 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 ACOX1Q15067 660 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 LLGL1Q15334 1064 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 PPM1JQ5JR12 505 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 SAMD5Q5TGI4 173 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 NXPE4Q6UWF7 544 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 LAYNQ6UX15 382 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 NPNTQ6UXI9 565 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 KYAT3Q6YP21 454 aaKnown RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 BBS12Q6ZW61 710 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 DPPA4Q7L190 304 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 NT5DC3Q86UY8 548 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 ZC3H18Q86VM9 953 aaKnown RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 NLRP8Q86W28 1048 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 CDKL3Q8IVW4 592 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 CCHCR1Q8TD31 782 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 KRT35Q92764 455 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 ECHDC3Q96DC8 303 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 VAT1Q99536 393 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 IL12RB2Q99665 862 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 RUBCNLQ9H714 662 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 ERVMER34-1Q9H9K5 563 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 EBF2Q9HAK2 575 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 GPAMQ9HCL2 828 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 SRA1Q9HD15 236 aaKnown RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 FZD3Q9NPG1 666 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 BRD7Q9NPI1 651 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 LZTFL1Q9NQ48 299 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 KLHL8Q9P2G9 620 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 GGT7Q9UJ14 662 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 RPL26L1Q9UNX3 145 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms