RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 CYP3A7-CYP3A51PA0A087WV96 503 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 A0A0G2JK05 382 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 A0A1W2PRG0 241 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 C3orf70A6NLC5 250 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-218ENST00000553309 RHODO00212 210 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 NBNO60934 754 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 IPO7O95373 1038 aaKnown RBP5.24□□□□□ -1.57
ATXN3-218ENST00000553309 SLC25A27O95847 323 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 ALPLP05186 524 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 CHRNB1P11230 501 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 CYP3A7P24462 503 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 SERPINB3P29508 390 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 CD151P48509 253 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 TDO2P48775 406 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 CLCN5P51795 746 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 PTGR1Q14914 329 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 C6orf10Q5SRN2 563 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 SYCP2LQ5T4T6 812 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 BEND3Q5T5X7 828 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 DAB2IPQ5VWQ8 1189 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 NUGGCQ68CJ6 796 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 LRIG3Q6UXM1 1119 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 RFX8Q6ZV50 586 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 BHLHA9Q7RTU4 235 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 RBM23Q86U06 439 aaKnown RBP5.24□□□□□ -1.57
ATXN3-218ENST00000553309 PAQR4Q8N4S7 273 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-218ENST00000553309 FAM71BQ8TC56 605 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 HMGB4Q8WW32 186 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 YME1L1Q96TA2 773 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 WDR83Q9BRX9 315 aaKnown RBP5.24□□□□□ -1.57
ATXN3-218ENST00000553309 ABHD16BQ9H3Z7 469 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 BICC1Q9H694 974 aaKnown RBP5.24□□□□□ -1.57
ATXN3-218ENST00000553309 AATFQ9NY61 560 aaKnown RBP eCLIP5.24□□□□□ -1.57
ATXN3-218ENST00000553309 CDH22Q9UJ99 828 aa5.24□□□□□ -1.57
ATXN3-218ENST00000553309 HELZ2Q9BYK8 2649 aaKnown RBP5.24□□□□□ -1.57
ATXN3-218ENST00000553309 RAD50Q92878 1312 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 ABHD14A-ACY1A0A1B0GW23 586 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 A6NNC1 897 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 LGALS16A8MUM7 142 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 LARGE1O95461 756 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 TOMM40O96008 361 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 SETSIPP0DME0 302 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 AOC1P19801 751 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 TKTP29401 623 aaKnown RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 NRIP1P48552 1158 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 GTF2A1P52655 376 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 FAM3BP58499 235 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 GAD2Q05329 585 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 RNASELQ05823 741 aaKnown RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 SF3A3Q12874 501 aaKnown RBP eCLIP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 FOXD4Q12950 439 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 COASYQ13057 564 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 RAPGEF1Q13905 1077 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 PFKFB4Q16877 469 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 C10orf76Q5T2E6 689 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 ATPAF1Q5TC12 328 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 ZNF549Q6P9A3 640 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 C9orf47Q6ZRZ4 202 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 CYB5R4Q7L1T6 521 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 FOXP4Q8IVH2 680 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 DDIASQ8IXT1 998 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 ANKRD44Q8N8A2 993 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 FAM133AQ8N9E0 248 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 SUMF1Q8NBK3 374 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 OR1N1Q8NGS0 311 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 CLEC4CQ8WTT0 213 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 RSC1A1Q92681 617 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 ATP2A3Q93084 1043 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 ADAD1Q96M93 576 aaKnown RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 CAMK1GQ96NX5 476 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 SORBS1Q9BX66 1292 aaKnown RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 ISY1Q9ULR0 285 aaKnown RBP5.23□□□□□ -1.57
ATXN3-218ENST00000553309 CNTN6Q9UQ52 1028 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 TNFSF13BQ9Y275 285 aa5.23□□□□□ -1.57
ATXN3-218ENST00000553309 A0A087WV62 115 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 FAM90A18PA6NE21 464 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 FAM90A16PA6NEW6 464 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 FAM90A9PA6NNJ1 464 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 FAM90A5PA8MXJ8 464 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 FAM90A15PP0C7V4 464 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 FAM90A14PP0C7W9 464 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 PEX19P40855 299 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 ARHGAP8P85298 464 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 TRDNQ13061 729 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 BTBD16Q32M84 506 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 TTC39AQ5SRH9 613 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 HMBOX1Q6NT76 420 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 TOGARAM2Q6ZUX3 1019 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 LRRC8DQ7L1W4 858 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 TRAPPC11Q7Z392 1133 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 FBXO16Q8IX29 292 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-218ENST00000553309 UBALD2Q8IYN6 164 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 LSM14AQ8ND56 463 aaKnown RBP5.22□□□□□ -1.57
ATXN3-218ENST00000553309 KAT2AQ92830 837 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 NSUN4Q96CB9 384 aaKnown RBP5.22□□□□□ -1.57
ATXN3-218ENST00000553309 SEZ6LQ9BYH1 1024 aa5.22□□□□□ -1.57
ATXN3-218ENST00000553309 WDR12Q9GZL7 423 aaKnown RBP5.22□□□□□ -1.57
ATXN3-218ENST00000553309 BRD8Q9H0E9 1235 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms